STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB88641.1Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; InterPro IPR001451:IPR020019; COGs: COG1044 UDP-3-O-(3-hydroxymyristoyl); KEGG: dps:DP0029 pilin glycosylation protein; SPTR: Q12VN4 Transferase hexapeptide repeat; PFAM: transferase hexapeptide repeat containing protein; TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family. (206 aa)    
Predicted Functional Partners:
SMB88637.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid); InterPro IPR003362; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; KEGG: ftn:FTN_1429 galactosyl transferase; SPTR: A0XZ34 Putative UDP-galactose phosphate transferase; PFAM: sugar transferase; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase.
    0.990
SMB88629.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; InterPro IPR000653; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; KEGG: ftn:FTN_1430 aminotransferase; SPTR: A1DS55 WbtN; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; PRIAM: Glutamine--scyllo-inositol transaminase; Belongs to the DegT/DnrJ/EryC1 family.
  0.988
SMB88651.1
Glycosyltransferase involved in cell wall bisynthesis; InterPro IPR001296; COGs: COG0438 Glycosyltransferase; KEGG: ank:AnaeK_4413 glycosyl transferase group 1; SPTR: P71053 Putative glycosyltransferase epsD; PFAM: glycosyl transferase group 1.
   
 0.825
SMB88673.1
UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase; InterPro IPR000888:IPR013120:IPR001509; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; KEGG: gbm:Gbem_1622 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; SPTR: A3WUD2 Probable NAD dependent epimerase/dehydratase, possibly involved in polysaccharide biosynthesis.
    
 0.810
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.780
fabZ
3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.
  
 
 0.723
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
   
 
 0.710
SMB88679.1
InterPro IPR003331; COGs: COG0381 UDP-N-acetylglucosamine 2-epimerase; KEGG: gbm:Gbem_1623 UDP-N-acetylglucosamine 2-epimerase; SPTR: A5KZT5 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; PRIAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
 
  0.697
SMB92264.1
Tetratricopeptide repeat-containing protein; InterPro IPR001440:IPR013105:IPR019734:IPR013026; COGs: COG3063 Tfp pilus assembly protein PilF; KEGG: TPR Domain containing protein; SPTR: Q24CU0 TPR Domain containing protein; SMART: Tetratricopeptide repeat; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein.
  
  
 0.637
SMB88731.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; InterPro IPR000653; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; KEGG: ect:ECIAI39_0979 dTDP-6-deoxy-D-xylo-4-hexulose aminotransferase (viosamine synthase); SPTR: A3Y091 Aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  0.634
Your Current Organism:
Desulfonispora thiosulfatigenes
NCBI taxonomy Id: 656914
Other names: D. thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes str. DSM 11270, Desulfonispora thiosulfatigenes strain DSM 11270
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