STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB88982.1InterPro IPR001173; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; KEGG: pna:Pnap_0285 glycosyl transferase family protein; SPTR: A4LG53 Putative inner membrane glycosyl transferase; PFAM: glycosyl transferase family 2. (423 aa)    
Predicted Functional Partners:
SMB96244.1
Polysaccharide deacetylase family sporulation protein PdaB; InterPro IPR002509; COGs: COG0726 xylanase/chitin deacetylase; KEGG: wpi:WPa_0574 polysaccharide deacetylase, putative; SPTR: A1HSC1 Polysaccharide deacetylase; PFAM: polysaccharide deacetylase.
 
 
 0.973
SMB92774.1
Polysaccharide deacetylase family sporulation protein PdaB; InterPro IPR002509; COGs: COG0726 xylanase/chitin deacetylase; KEGG: wol:WD0720 polysaccharide deacetylase, putative; SPTR: A0YQB7 Polysaccharide deacetylase; PFAM: polysaccharide deacetylase.
 
 
 0.973
SMB94135.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family; InterPro IPR002509; COGs: COG0726 xylanase/chitin deacetylase; KEGG: wri:WRi_006610 polysaccharide deacetylase, putative; SPTR: A1HSC1 Polysaccharide deacetylase; PFAM: polysaccharide deacetylase.
 
 
 0.972
SMB92264.1
Tetratricopeptide repeat-containing protein; InterPro IPR001440:IPR013105:IPR019734:IPR013026; COGs: COG3063 Tfp pilus assembly protein PilF; KEGG: TPR Domain containing protein; SPTR: Q24CU0 TPR Domain containing protein; SMART: Tetratricopeptide repeat; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein.
  
 0.952
SMB88990.1
Polymer-forming protein; KEGG: surface antigen BspA-like; SPTR: A2DNV8 Surface antigen BspA-like.
 
   
 0.928
SMB94628.1
Tetratricopeptide repeat-containing protein; InterPro IPR001440:IPR013105:IPR019734:IPR013026; COGs: COG3063 Tfp pilus assembly protein PilF; KEGG: hypothetical protein; SPTR: O26186 O-linked GlcNAc transferase; SMART: Tetratricopeptide repeat; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein.
  
 
 0.903
SMB92425.1
Spore germination protein YaaH; InterPro IPR001119:IPR001223:IPR011583:IPR001579; COGs: COG3858 glycosyl hydrolase; KEGG: wsu:WS0692 hypothetical protein; SPTR: O31682 Putative glycosylase ykvQ; SMART: chitinase II; PFAM: glycoside hydrolase family 18; S-layer domain protein.
      0.900
SMB88249.1
Diguanylate cyclase (GGDEF) domain-containing protein; InterPro IPR001633:IPR000160:IPR003660; COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; KEGG: bph:Bphy_0391 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SPTR: A4U5J6 Putative uncharacterized protein; SMART: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; PFAM: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; TIGRFAM: diguanylate cyclase.
 
 
 0.893
SMB89002.1
DHHW protein; KEGG: pgtC; glycosyltransferase; SPTR: A5KIP1 Putative uncharacterized protein.
 
 
 0.880
SMB96218.1
Tetratricopeptide repeat-containing protein; InterPro IPR001440:IPR013105:IPR019734:IPR013026; KEGG: mxa:MXAN_1144 TPR domain-containing protein; SPTR: Q22AU4 SLEI family protein; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide repeat.
 
 
 0.841
Your Current Organism:
Desulfonispora thiosulfatigenes
NCBI taxonomy Id: 656914
Other names: D. thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes str. DSM 11270, Desulfonispora thiosulfatigenes strain DSM 11270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.