STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB89038.1Protein of unknown function; KEGG: dat:HRM2_21160 hypothetical protein; SPTR: A2STV3 Putative uncharacterized protein. (226 aa)    
Predicted Functional Partners:
SMB89011.1
VTC domain-containing protein; InterPro IPR018966; KEGG: sil:SPO1527 hypothetical protein; SPTR: A2STV2 Putative uncharacterized protein; PFAM: VTC domain.
 
    0.982
SMB89040.1
CotH protein; InterPro IPR014867; KEGG: scl:sce0771 hypothetical protein; SPTR: A4AM36 Putative uncharacterized protein; PFAM: Spore coat protein CotH.
 
     0.940
SMB89002.1
DHHW protein; KEGG: pgtC; glycosyltransferase; SPTR: A5KIP1 Putative uncharacterized protein.
 
     0.658
SMB88990.1
Polymer-forming protein; KEGG: surface antigen BspA-like; SPTR: A2DNV8 Surface antigen BspA-like.
 
     0.569
SMB88982.1
InterPro IPR001173; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; KEGG: pna:Pnap_0285 glycosyl transferase family protein; SPTR: A4LG53 Putative inner membrane glycosyl transferase; PFAM: glycosyl transferase family 2.
       0.531
SMB88979.1
Hypothetical protein; KEGG: nam:NAMH_1715 O-antigen polymerase family.
       0.521
SMB82346.1
Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.
    
   0.515
SMB93317.1
Ca2+-transporting ATPase; InterPro IPR000695:IPR001757:IPR006068:IPR008250:IPR005834:IPR0040 14:IPR018303:IPR006408:IPR005782; COGs: COG0474 Cation transport ATPase; KEGG: sat:SYN_01009 calcium-transporting ATPase; SPTR: A1HMY8 Calcium-translocating P-type ATPase, PMCA-type; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; TIGRFAM: calcium-translocating P-type ATPase, SERCA-type; calcium-translocating P-type ATPase, PMCA-type; ATPase, P-type (transporting), HAD superfamily, subfamily IC.
  
 
 0.449
SMB80002.1
Mg2+-importing ATPase; TIGRFAM: magnesium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; InterPro IPR006415:IPR000695:IPR001757:IPR006068:IPR008250:IPR0058 34:IPR004014:IPR018303; KEGG: bur:Bcep18194_B1281 magnesium-translocating P-type ATPase; SPTR: A2VYE3 Cation transport ATPase; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; COGs: COG0474 Cation transport ATPase.
  
 
 0.449
SMB80027.1
Ca2+-transporting ATPase; InterPro IPR000695:IPR001757:IPR006068:IPR008250:IPR005834:IPR0040 14:IPR018303; COGs: COG0474 Cation transport ATPase; KEGG: dde:Dde_1893 ATPase, E1-E2 type; SPTR: A9A784 ATPase, P-type (Transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; PRIAM: Calcium-transporting ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC.
  
 
 0.449
Your Current Organism:
Desulfonispora thiosulfatigenes
NCBI taxonomy Id: 656914
Other names: D. thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes str. DSM 11270, Desulfonispora thiosulfatigenes strain DSM 11270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.