STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB89133.1Succinate dehydrogenase subunit B; InterPro IPR001450:IPR017900:IPR004489; COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; KEGG: mxa:MXAN_3540 succinate dehydrogenase iron-sulfur subunit; SPTR: A2UAZ5 Succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein. (256 aa)    
Predicted Functional Partners:
SMB89145.1
InterPro IPR011138; KEGG: scl:sce8307 succinate dehydrogenase; SPTR: P08064 Succinate dehydrogenase cytochrome b558 subunit; TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family.
 
 0.999
SMB89136.1
Succinate dehydrogenase subunit A; InterPro IPR013027:IPR004112:IPR003953:IPR003952:IPR011280; COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; KEGG: mxa:MXAN_3539 succinate dehydrogenase flavoprotein subunit; SPTR: P08065 Succinate dehydrogenase flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit.
 
 0.997
SMB83517.1
4Fe-4S dicluster domain-containing protein; InterPro IPR001450:IPR017900; KEGG: dal:Dalk_1151 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: Q9P9J2 Polyferredoxin; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein.
   
 
 0.997
SMB83330.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase; InterPro IPR001450:IPR019752:IPR019456:IPR002880:IPR017900:IPR0118 95; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; KEGG: dvl:Dvul_0348 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; SPTR: A1HPH8 Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; Pyruvate-flavodoxin oxidoreduct [...]
  
 0.990
SMB87601.1
Succinate dehydrogenase subunit A; InterPro IPR013027:IPR004112:IPR006076:IPR004792:IPR003953:IPR0039 52:IPR014006; COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; KEGG: nam:NAMH_1126 fumarate reductase flavoprotein subunit; SPTR: A1HLQ0 Succinate dehydrogenase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; HI0933 family protein; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit.
 
 0.985
SMB88307.1
KEGG: pol:Bpro_5110 FAD dependent oxidoreductase; SPTR: A3IDX8 Putative uncharacterized protein.
  
 0.930
SMB92785.1
FAD dependent oxidoreductase; KEGG: mes:Meso_2295 glucose-inhibited division protein A; SPTR: A3IDX8 Putative uncharacterized protein.
  
 0.930
SMB81741.1
Citrate synthase; InterPro IPR002020:IPR019810; COGs: COG0372 Citrate synthase; KEGG: noc:Noc_2628 methylcitrate synthase; SPTR: Q974S5 Citrate synthase; PFAM: Citrate synthase; PRIAM: Citrate (Si)-synthase; Belongs to the citrate synthase family.
 
 0.879
SMB89984.1
2-enoate reductase; InterPro IPR013027:IPR000103:IPR001327:IPR001155; COGs: COG1902 NADH:flavin oxidoreductase Old Yellow Enzyme family; KEGG: vfm:VFMJ11_A0422 NADH oxidase; SPTR: O29794 NADH oxidase (NoxB-1); PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
 0.872
SMB87589.1
Fumarase, class I alpha subunit; InterPro IPR004646; COGs: COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I N-terminal domain; KEGG: dds:Ddes_1528 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; SPTR: A1HLQ2 Hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; PRIAM: Fumarate hydratase; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit.
  
 
 0.841
Your Current Organism:
Desulfonispora thiosulfatigenes
NCBI taxonomy Id: 656914
Other names: D. thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes str. DSM 11270, Desulfonispora thiosulfatigenes strain DSM 11270
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