STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
SMB78765.1LysM repeat-containing protein; InterPro IPR018392:IPR002482; KEGG: prw:PsycPRwf_1583 lytic transglycosylase, catalytic; SPTR: A2RHZ5 Probable N-acetylmuramidase; SMART: Peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain. (326 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
 0.746
SMB80916.1
KEGG: hypothetical protein; SPTR: P37495 Uncharacterized protein yybI.
  
     0.685
SMB85624.1
Spore germination protein KB; InterPro IPR004761; KEGG: hypothetical protein; SPTR: A3F904 GerVB; PFAM: Spore germination protein; TIGRFAM: spore germination protein.
  
     0.684
SMB87966.1
Spore germination protein KB; InterPro IPR004761; KEGG: hypothetical protein; SPTR: A3F904 GerVB; PFAM: Spore germination protein; TIGRFAM: spore germination protein.
  
     0.679
SMB87963.1
Spore germination protein KC; InterPro IPR008844; KEGG: hypothetical protein; SPTR: A3I9M6 Spore germination protein KC; PFAM: spore germination B3 GerAC family protein; TIGRFAM: germination protein, Ger(x)C family.
  
     0.647
SMB83253.1
Uridine kinase; InterPro IPR000764:IPR003593; COGs: COG0572 Uridine kinase; KEGG: ade:Adeh_3723 cyclic nucleotide-binding domain-containing protein; SPTR: A1HRZ0 Phosphoribulokinase/uridine kinase; SMART: AAA ATPase.
    
  0.645
cinA
Nicotinamide-nucleotide amidase; InterPro IPR001453:IPR008136:IPR008135; COGs: COG1058 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; KEGG: dds:Ddes_1466 competence/damage-inducible protein CinA; SPTR: A6M320 Putative competence-damage inducible protein; PFAM: CinA domain protein; molybdopterin binding domain; TIGRFAM: competence/damage-inducible protein CinA.
  
 
  0.641
SMB80719.1
Peroxiredoxin (alkyl hydroperoxide reductase subunit C); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
   
 0.594
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.572
SMB89385.1
N-acetylmuramoyl-L-alanine amidase; InterPro IPR010466:IPR013247:IPR002508:IPR003646; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; KEGG: ppd:Ppro_1062 N-acetylmuramoyl-L-alanine amidase; SPTR: A1HST8 Transcriptional regulator, Fis family; SMART: cell wall hydrolase/autolysin; SH3 domain protein; PFAM: cell wall hydrolase/autolysin; SH3 type 3 domain protein; protein of unknown function DUF1058; PRIAM: N-acetylmuramoyl-L-alanine amidase.
  
 
 0.547
Your Current Organism:
Desulfonispora thiosulfatigenes
NCBI taxonomy Id: 656914
Other names: D. thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes str. DSM 11270, Desulfonispora thiosulfatigenes strain DSM 11270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.