STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB79036.1Nitroreductase family protein; KEGG: har:HEAR2542 putative oxidoreductase; SPTR: A9A6K7 Nitroreductase. (100 aa)    
Predicted Functional Partners:
SMB79040.1
Nitroreductase family protein; InterPro IPR000415; COGs: COG0778 Nitroreductase; KEGG: dat:HRM2_39890 two-component fusion protein (N:nitroreductase family protein-C:ferredoxin domain); SPTR: Q6M045 Nitroreductase family; PFAM: nitroreductase.
     0.993
SMB94180.1
uroporphyrinogen-III synthase; InterPro IPR000878:IPR003754:IPR003043:IPR006366; COGs: COG0007 Uroporphyrinogen-III methylase; KEGG: dal:Dalk_4009 uroporphyrin-III C-methyltransferase; SPTR: A1HSI5 Uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; TIGRFAM: uroporphyrin-III C-methyltransferase.
  
 
 0.821
birA
Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.687
SMB94118.1
Riboflavin kinase / FMN adenylyltransferase; InterPro IPR015864:IPR015865:IPR002606; COGs: COG0196 FAD synthase; KEGG: gbm:Gbem_2599 riboflavin biosynthesis protein RibF; SPTR: A1ZFF9 Riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin biosynthesis protein RibF; Belongs to the ribF family.
    
 0.666
menE
2-succinylbenzoyl-CoA synthetase; Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl-CoA (OSB-CoA); Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily.
   
 
 0.665
SMB82202.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase; COGs: COG0446 NAD(FAD)-dependent dehydrogenase; KEGG: vfm:VFMJ11_2168 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: A4BEA8 Putative NADH oxidase; InterPro IPR013027:IPR000103:IPR001327:IPR004099:IPR001763; SMART: Rhodanese domain protein; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; Rhodanese domain protein.
    
 0.627
SMB96220.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase; InterPro IPR013027:IPR000103:IPR001327:IPR004099:IPR001763; COGs: COG0446 NAD(FAD)-dependent dehydrogenase; KEGG: vpa:VPA0949 putative NADH oxidase; SPTR: A2P2Z9 NADH oxidase, putative; SMART: Rhodanese domain protein; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; Rhodanese domain protein.
    
 0.627
SMB96346.1
Lactoylglutathione lyase; InterPro IPR004360; KEGG: dat:HRM2_23730 LguL; SPTR: A5KJA5 Putative uncharacterized protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase.
  
  
 0.578
SMB84667.1
InterPro IPR013525:IPR000412; KEGG: rpe:RPE_1668 ABC-2 type transporter; SPTR: A3WX69 Putative ABC transporter, ATP-binding protein; PFAM: ABC-2 type transporter.
 
  
 0.572
SMB89984.1
2-enoate reductase; InterPro IPR013027:IPR000103:IPR001327:IPR001155; COGs: COG1902 NADH:flavin oxidoreductase Old Yellow Enzyme family; KEGG: vfm:VFMJ11_A0422 NADH oxidase; SPTR: O29794 NADH oxidase (NoxB-1); PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.544
Your Current Organism:
Desulfonispora thiosulfatigenes
NCBI taxonomy Id: 656914
Other names: D. thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes str. DSM 11270, Desulfonispora thiosulfatigenes strain DSM 11270
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