STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB79065.1Protein of unknown function; KEGG: hypothetical protein. (153 aa)    
Predicted Functional Partners:
SMB79061.1
Signal transduction histidine kinase; InterPro IPR004358:IPR003594:IPR003660:IPR003661:IPR005467; COGs: COG0642 Signal transduction histidine kinase; KEGG: gme:Gmet_2694 PAS/PAC sensor signal transduction histidine kinase; SPTR: A1BZN4 Sensor protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein.
       0.538
SMB79051.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain; PFAM: response regulator receiver; transcriptional regulator domain protein; InterPro IPR001789:IPR001867; KEGG: dvm:DvMF_0882 two component transcriptional regulator, winged helix family; SPTR: Q7A0U4 Transcriptional regulatory protein srrA; SMART: response regulator receiver; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
       0.527
SMB90534.1
InterPro IPR000671; COGs: COG0680 Ni Fe-hydrogenase maturation factor; KEGG: sfu:Sfum_2951 hydrogenase expression/formation protein; SPTR: Q9UYY5 Hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; TIGRFAM: hydrogenase maturation protease.
  
 
   0.526
SMB90513.1
InterPro IPR001199; COGs: COG4892 heme/steroid binding protein; KEGG: sfu:Sfum_3227 cytochrome b5; SPTR: Q46D79 Putative uncharacterized protein; PFAM: cytochrome b5.
  
     0.482
SMB80043.1
Recombinase zinc beta ribbon domain-containing protein; SPTR: A2U5P8 Recombinase; KEGG: hypothetical protein.
  
     0.415
Your Current Organism:
Desulfonispora thiosulfatigenes
NCBI taxonomy Id: 656914
Other names: D. thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes str. DSM 11270, Desulfonispora thiosulfatigenes strain DSM 11270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.