STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB80240.14Fe-4S dicluster domain-containing protein; InterPro IPR001080:IPR001450:IPR017900; COGs: COG4231 Indolepyruvate ferredoxin oxidoreductase alpha and beta subunits; KEGG: dps:DP2755 ferredoxin III; SPTR: A1HQ03 4Fe-4S ferredoxin, iron-sulfur binding domain protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein. (60 aa)    
Predicted Functional Partners:
SMB83330.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase; InterPro IPR001450:IPR019752:IPR019456:IPR002880:IPR017900:IPR0118 95; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; KEGG: dvl:Dvul_0348 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; SPTR: A1HPH8 Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; Pyruvate-flavodoxin oxidoreduct [...]
  
 0.970
SMB87924.1
(2Fe-2S) ferredoxin; KEGG: sfu:Sfum_0845 NADH dehydrogenase (quinone); SPTR: B7R2Q5 Respiratory-chain NADH dehydrogenase 51 Kd subunit family.
    
 0.861
SMB83517.1
4Fe-4S dicluster domain-containing protein; InterPro IPR001450:IPR017900; KEGG: dal:Dalk_1151 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: Q9P9J2 Polyferredoxin; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein.
  
 
 0.852
SMB80237.1
InterPro IPR006067:IPR011806; COGs: COG2221 Dissimilatory sulfite reductase (desulfoviridin) alpha and beta subunits; KEGG: dps:DP0797 dissimilatory sulfite reductase, alpha subunit (DsrA); SPTR: A4K345 Dissimilatory sulfite-reductase alpha subunit (Fragment); PFAM: nitrite and sulphite reductase 4Fe-4S region; PRIAM: Hydrogensulfite reductase; TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit.
 
 
 0.801
SMB80227.1
Dissimilatory sulfite reductase beta subunit; InterPro IPR006067:IPR001450:IPR005117:IPR017900:IPR011808; COGs: COG2221 Dissimilatory sulfite reductase (desulfoviridin) alpha and beta subunits; KEGG: sfu:Sfum_4043 sulfite reductase, dissimilatory-type beta subunit; SPTR: A1HQ01 Sulfite reductase, dissimilatory-type beta subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; 4Fe-4S ferredoxin iron-sulfur binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; PRIAM: Hydrogensulfite reductase; TIGRFAM: sulfite reductase, dissimilatory [...]
 
 
 0.790
SMB82978.1
TIGRFAM: pyruvate kinase; InterPro IPR015793:IPR008279:IPR015794:IPR018209:IPR001697; COGs: COG0469 Pyruvate kinase; KEGG: dps:DP3116 pyruvate kinase; SPTR: P80885 Pyruvate kinase; PFAM: Pyruvate kinase barrel; PEP-utilising protein mobile region; Pyruvate kinase alpha/beta; Belongs to the pyruvate kinase family.
     
 0.670
SMB89136.1
Succinate dehydrogenase subunit A; InterPro IPR013027:IPR004112:IPR003953:IPR003952:IPR011280; COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; KEGG: mxa:MXAN_3539 succinate dehydrogenase flavoprotein subunit; SPTR: P08065 Succinate dehydrogenase flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit.
  
 0.587
SMB87601.1
Succinate dehydrogenase subunit A; InterPro IPR013027:IPR004112:IPR006076:IPR004792:IPR003953:IPR0039 52:IPR014006; COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; KEGG: nam:NAMH_1126 fumarate reductase flavoprotein subunit; SPTR: A1HLQ0 Succinate dehydrogenase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; HI0933 family protein; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit.
  
 0.587
SMB88307.1
KEGG: pol:Bpro_5110 FAD dependent oxidoreductase; SPTR: A3IDX8 Putative uncharacterized protein.
  
 0.587
SMB92785.1
FAD dependent oxidoreductase; KEGG: mes:Meso_2295 glucose-inhibited division protein A; SPTR: A3IDX8 Putative uncharacterized protein.
  
 0.587
Your Current Organism:
Desulfonispora thiosulfatigenes
NCBI taxonomy Id: 656914
Other names: D. thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes str. DSM 11270, Desulfonispora thiosulfatigenes strain DSM 11270
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