STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB82346.1Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. (256 aa)    
Predicted Functional Partners:
flhB
Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.
 0.999
fliQ
Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
 
 
 0.999
fliP
Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
 
 
 0.999
SMB82225.1
Flagellar motor switch protein FliN/FliY; InterPro IPR001172:IPR001543:IPR007597:IPR012826; COGs: COG1776 Chemotaxis protein CheC inhibitor of MCP methylation; KEGG: sde:Sde_2174 surface presentation of antigens (SpoA) protein; SPTR: A2U857 CheC, inhibitor of MCP methylation; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein; TIGRFAM: flagellar motor switch protein FliN.
 
 
 0.998
flhA
Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
 
  
 0.994
SMB82268.1
Flagellar basal-body rod protein FlgG; InterPro IPR001444:IPR010930:IPR020013; COGs: COG4786 Flagellar basal body rod protein; KEGG: hch:HCH_04085 flagellar basal body rod protein; SPTR: P0A1J3 Flagellar basal-body rod protein flgG; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; TIGRFAM: fagellar hook-basal body protein.
 
 
 0.989
SMB82393.1
InterPro IPR001172:IPR001543; COGs: COG1886 Flagellar motor switch/type III secretory pathway protein; KEGG: tgr:Tgr7_1329 flagellar motor switch protein FliN; SPTR: A2U857 CheC, inhibitor of MCP methylation; PFAM: surface presentation of antigens (SPOA) protein.
 
 
 0.987
SMB82236.1
Flagellar motor switch protein FliM; InterPro IPR001689:IPR001172:IPR001543; COGs: COG1868 Flagellar motor switch protein; KEGG: wsu:WS1638 flagellar motor switch protein FliM; SPTR: A1HN28 Flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; TIGRFAM: flagellar motor switch protein FliM.
 
  
 0.982
SMB82439.1
Flagellar basal-body rod modification protein FlgD; InterPro IPR005648; COGs: COG1843 Flagellar hook capping protein; KEGG: swp:swp_5107 flagellar hook capping protein; SPTR: A1HN34 Flagellar hook capping protein; PFAM: flagellar hook capping protein.
 
 
 0.976
SMB82385.1
Flagellar protein FliO/FliZ; KEGG: ppd:Ppro_3439 hypothetical protein.
  
  
 0.974
Your Current Organism:
Desulfonispora thiosulfatigenes
NCBI taxonomy Id: 656914
Other names: D. thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes str. DSM 11270, Desulfonispora thiosulfatigenes strain DSM 11270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.