STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB82640.1Conserved hypothetical protein (putative transposase or invertase); KEGG: wol:WD0296 hypothetical protein; SPTR: Q2FP67 Putative uncharacterized protein. (380 aa)    
Predicted Functional Partners:
SMB82642.1
COGs: COG5464 conserved hypothetical protein; KEGG: rbo:A1I_00565 transposase; SPTR: A5L0E2 Putative uncharacterized protein.
 
    
0.557
SMB87214.1
Thioredoxin; KEGG: nis:NIS_1241 thioredoxin; SPTR: P96695 Thioredoxin-like protein ydfQ.
  
     0.459
SMB88308.1
Conserved hypothetical protein (putative transposase or invertase); KEGG: stm:PSLT051 putative cytoplasmic protein; SPTR: P37415 Uncharacterized protein pSLT051.
  
     0.452
SMB96732.1
Putative transposase, YhgA-like; KEGG: stm:PSLT051 putative cytoplasmic protein; SPTR: P37415 Uncharacterized protein pSLT051.
  
     0.443
SMB80469.1
Conserved hypothetical protein (putative transposase or invertase); KEGG: stm:PSLT051 putative cytoplasmic protein; SPTR: P37415 Uncharacterized protein pSLT051.
  
     0.435
SMB88858.1
Nuclease-related domain-containing protein; KEGG: sun:SUN_1494 hypothetical protein; SPTR: Q8KYT4 Uncharacterized protein pXO1-01/BXA0003/GBAA_pXO1_0003; PFAM: NERD domain protein; InterPro IPR011528.
  
     0.417
SMB96097.1
Putative amidase domain-containing protein; SPTR: O31589 Uncharacterized protein yhbB.
  
     0.408
SMB89970.1
InterPro IPR006842; COGs: COG5464 conserved hypothetical protein; KEGG: scl:sce8068 putative transposase; SPTR: P37415 Uncharacterized protein pSLT051; PFAM: putative transposase YhgA family protein.
  
     0.406
SMB85817.1
InterPro IPR010235; KEGG: mca:MCA0271 hypothetical protein; SPTR: A1HMB0 Nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: Nucleotidyltransferase substrate binding protein HI0074; TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family.
  
     0.405
Your Current Organism:
Desulfonispora thiosulfatigenes
NCBI taxonomy Id: 656914
Other names: D. thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes str. DSM 11270, Desulfonispora thiosulfatigenes strain DSM 11270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.