STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB82782.1Flagellar protein FlaG; InterPro IPR005186; KEGG: dal:Dalk_0647 flagellar protein FlaG protein; SPTR: A2U7M8 Flagellar protein FlaG protein; PFAM: flagellar protein FlaG protein. (125 aa)    
Predicted Functional Partners:
fliW
Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.
  
    0.999
SMB82769.1
Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
  
 0.990
SMB82744.1
Flagellar protein FliS; InterPro IPR003713; COGs: COG1516 Flagellin-specific chaperone FliS; KEGG: pca:Pcar_1111 flagellar protein FliS; SPTR: A3IC42 Flagellar protein FliS; PFAM: flagellar protein FliS; TIGRFAM: flagellar protein FliS.
 
  
 0.983
SMB82225.1
Flagellar motor switch protein FliN/FliY; InterPro IPR001172:IPR001543:IPR007597:IPR012826; COGs: COG1776 Chemotaxis protein CheC inhibitor of MCP methylation; KEGG: sde:Sde_2174 surface presentation of antigens (SpoA) protein; SPTR: A2U857 CheC, inhibitor of MCP methylation; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein; TIGRFAM: flagellar motor switch protein FliN.
 
    0.958
flgK
InterPro IPR002371:IPR001444:IPR010930; COGs: COG1256 Flagellar hook-associated protein; KEGG: bba:Bd0540 FlgK, flagellar hook-associated protein; SPTR: P39810 Flagellar hook-associated protein 1; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; TIGRFAM: flagellar hook-associated protein FlgK.
 
    0.943
SMB82812.1
Flagellar hook-associated protein 3 FlgL; InterPro IPR001492:IPR013384; COGs: COG1344 Flagellin and related hook-associated protein; KEGG: gme:Gmet_0439 flagellin-like; SPTR: A2U7L8 Flagellar hook-associated protein 3; PFAM: flagellin domain protein; TIGRFAM: flagellar hook-associated protein 3; Belongs to the bacterial flagellin family.
 
 
 0.931
csrA
Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.
  
    0.914
SMB82236.1
Flagellar motor switch protein FliM; InterPro IPR001689:IPR001172:IPR001543; COGs: COG1868 Flagellar motor switch protein; KEGG: wsu:WS1638 flagellar motor switch protein FliM; SPTR: A1HN28 Flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; TIGRFAM: flagellar motor switch protein FliM.
 
  
 0.898
SMB92827.1
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
   
   0.882
SMB96633.1
Two-component system, chemotaxis family, sensor kinase CheA; InterPro IPR004358:IPR008207:IPR004105:IPR010808:IPR002545:IPR0035 94:IPR005467; COGs: COG0643 Chemotaxis protein histidine kinase and related kinase; KEGG: nam:NAMH_0362 chemotaxis protein CheA; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; PFAM: P2 response regulator binding domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; CheW domain protein; ATP-binding region ATPase domain protein; SPTR: A1HMP8 CheA signal transduction histidine kinases.
  
   0.854
Your Current Organism:
Desulfonispora thiosulfatigenes
NCBI taxonomy Id: 656914
Other names: D. thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes str. DSM 11270, Desulfonispora thiosulfatigenes strain DSM 11270
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