STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB83541.1Hypothetical protein; InterPro IPR013736:IPR000383; COGs: COG2936 acyl esterase; KEGG: noc:Noc_2221 peptidase S15; SPTR: A5DMU6 Putative uncharacterized protein; PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein. (682 aa)    
Predicted Functional Partners:
mtnA
Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).
 
      0.707
SMB83551.1
Betaine/carnitine transporter, BCCT family; InterPro IPR000060; COGs: COG1292 Choline-glycine betaine transporter; KEGG: dat:HRM2_01240 BetT; SPTR: A0YEM3 Choline transporter; PFAM: BCCT transporter; TIGRFAM: choline/carnitine/betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family.
       0.596
Your Current Organism:
Desulfonispora thiosulfatigenes
NCBI taxonomy Id: 656914
Other names: D. thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes str. DSM 11270, Desulfonispora thiosulfatigenes strain DSM 11270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.