STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ecfTEnergy-coupling factor transport system permease protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. (265 aa)    
Predicted Functional Partners:
ecfA
Energy-coupling factor transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 0.999
ecfA-2
Energy-coupling factor transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 0.999
truA
tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
 
  
 0.970
SMB86169.1
Biotin transport system substrate-specific component; InterPro IPR003784; COGs: COG1268 conserved hypothetical protein; KEGG: BioY family protein; SPTR: P22819 Probable biotin transporter bioY; PFAM: BioY protein.
 
 0.970
SMB82927.1
Energy-coupling factor transport system ATP-binding protein; InterPro IPR003439:IPR003593:IPR017871; COGs: COG1122 ABC-type cobalt transport system ATPase component; KEGG: vha:VIBHAR_05108 ATP-binding ABC transporter; SPTR: Q734T1 Putative ABC transporter ATP-binding protein BCE_3323; SMART: AAA ATPase; PFAM: ABC transporter related.
 
 0.940
SMB87139.1
Biotin transport system substrate-specific component; InterPro IPR003784; KEGG: sat:SYN_00210 hypothetical protein; SPTR: A3IB54 Biotin synthase; PFAM: BioY protein.
 
 0.910
SMB89689.1
Oligopeptide transport system ATP-binding protein; InterPro IPR003439:IPR003593:IPR017871; COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; KEGG: bba:Bd2190 oligopeptide ABC transporter, ATP-binding protein; SPTR: A3DLE4 Oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase; PFAM: ABC transporter related.
 
 0.904
SMB86167.1
COGs: COG4684 membrane protein; SPTR: A5KPV1 Putative uncharacterized protein.
 
 
 
 0.884
SMB86781.1
InterPro IPR009825; COGs: COG4720 membrane protein; KEGG: ppr:PBPRA2239 hypothetical protein; SPTR: Q5JEW0 Hypothetical membrane protein, conserved, DUF1393 family; PFAM: protein of unknown function DUF1393.
 
 
 0.848
SMB82926.1
Energy-coupling factor transport system substrate-specific component; KEGG: ppr:PBPRA2239 hypothetical protein; SPTR: A4EBP6 Putative uncharacterized protein.
  
 
 0.713
Your Current Organism:
Desulfonispora thiosulfatigenes
NCBI taxonomy Id: 656914
Other names: D. thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes str. DSM 11270, Desulfonispora thiosulfatigenes strain DSM 11270
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