STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB86169.1Biotin transport system substrate-specific component; InterPro IPR003784; COGs: COG1268 conserved hypothetical protein; KEGG: BioY family protein; SPTR: P22819 Probable biotin transporter bioY; PFAM: BioY protein. (212 aa)    
Predicted Functional Partners:
ecfT
Energy-coupling factor transport system permease protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 0.970
ecfA-2
Energy-coupling factor transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 
 0.946
ecfA
Energy-coupling factor transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 
 0.944
SMB82935.1
Energy-coupling factor transport system permease protein; InterPro IPR003339; KEGG: ppr:PBPRA2241 putative ABC transporter, membrane-spanning permease; SPTR: Q2NFA7 Conserved hypothetical membrane-spanning protein; PFAM: cobalt transport protein.
  
 0.936
SMB86167.1
COGs: COG4684 membrane protein; SPTR: A5KPV1 Putative uncharacterized protein.
     
 0.758
SMB87139.1
Biotin transport system substrate-specific component; InterPro IPR003784; KEGG: sat:SYN_00210 hypothetical protein; SPTR: A3IB54 Biotin synthase; PFAM: BioY protein.
  
  
 
0.696
birA
Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
 
   
 0.677
coaX
Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.
       0.630
SMB86160.1
Ca2+-transporting ATPase; InterPro IPR000695:IPR001757:IPR006068:IPR008250:IPR005834:IPR0040 14:IPR018303; COGs: COG0474 Cation transport ATPase; KEGG: sat:SYN_01009 calcium-transporting ATPase; SPTR: A4E9R0 Putative uncharacterized protein; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; PRIAM: Calcium-transporting ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC.
       0.563
SMB86180.1
Aromatic-amino-acid transaminase; InterPro IPR000796:IPR004839; COGs: COG1448 Aspartate/tyrosine/aromatic aminotransferase; KEGG: similar to putative aminotransferase; SPTR: A1HRY5 Aminotransferase, class I and II; PFAM: aminotransferase class I and II.
 
     0.538
Your Current Organism:
Desulfonispora thiosulfatigenes
NCBI taxonomy Id: 656914
Other names: D. thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes str. DSM 11270, Desulfonispora thiosulfatigenes strain DSM 11270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.