STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB86710.1Amino acid ABC transporter ATP-binding protein, PAAT family; InterPro IPR003439:IPR003593:IPR017871; COGs: COG1126 ABC-type polar amino acid transport system ATPase component; KEGG: spe:Spro_0822 ABC transporter-related protein; SPTR: A8TE77 ABC transporter related; SMART: AAA ATPase; PFAM: ABC transporter related. (240 aa)    
Predicted Functional Partners:
SMB86714.1
Amino acid ABC transporter membrane protein, PAAT family; InterPro IPR000515:IPR010065; COGs: COG0765 ABC-type amino acid transport system permease component; KEGG: gbm:Gbem_0984 polar amino acid ABC transporter, inner membrane subunit; SPTR: A1HT15 Polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit.
 0.999
SMB85742.1
Amino acid ABC transporter membrane protein, PAAT family; InterPro IPR000515:IPR010065; COGs: COG0765 ABC-type amino acid transport system permease component; KEGG: dde:Dde_0167 amino acid ABC transporter permease; SPTR: Q8PVM3 Glutamine transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit.
 0.997
SMB79323.1
Amino acid ABC transporter membrane protein, PAAT family; InterPro IPR000515:IPR010065; COGs: COG0765 ABC-type amino acid transport system permease component; KEGG: dps:DP1983 glutamine ABC-transporter, permease protein (GlnP); SPTR: A3IFN2 Putative uncharacterized protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.
 0.994
SMB86715.1
Amino acid ABC transporter substrate-binding protein, PAAT family; InterPro IPR001638; COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; KEGG: gsu:GSU0800 amino acid ABC transporter, periplasmic amino acid-binding protein; SPTR: A1HNU4 Extracellular solute-binding protein, family 3; SMART: extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3.
 0.969
SMB85745.1
Amino acid ABC transporter substrate-binding protein, PAAT family; InterPro IPR001638:IPR001320; COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; KEGG: dde:Dde_0168 extracellular solute-binding protein; SPTR: Q8PVM4 Glutamine-binding protein; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; PFAM: extracellular solute-binding protein family 3.
 0.953
SMB81593.1
InterPro IPR000515; COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; KEGG: dde:Dde_1183 putative permease of ABC transporter; SPTR: A3IEF4 Oligopeptide ABC transporter permease; PFAM: binding-protein-dependent transport systems inner membrane component.
 
    
 0.900
SMB79565.1
ATP-binding cassette, subfamily B; InterPro IPR003439:IPR001140:IPR003593:IPR017871:IPR017940; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; KEGG: scl:sce5645 carbohydrate ABC transporter; SPTR: A5KMT6 Putative uncharacterized protein; SMART: AAA ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region.
 
     
0.899
SMB79920.1
ATP-binding cassette, subfamily C, CydD; InterPro IPR003439:IPR001140:IPR003593:IPR017940:IPR014216; COGs: COG4988 ABC-type transport system involved in cytochrome bd biosynthesis ATPase and permease components; KEGG: pha:PSHAa2021 cysteine ABC transporter ATP-binding protein; SPTR: A1HT25 ABC transporter, transmembrane region, type 1; SMART: AAA ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD.
 
     
0.899
SMB79297.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; InterPro IPR001851; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; KEGG: bba:Bd3387 branched-chain amino acid ABC transporter, permease protein; SPTR: A1HSL5 Inner-membrane translocator; PFAM: inner-membrane translocator.
 
    
 0.889
SMB89669.1
Peptide/nickel transport system permease protein; InterPro IPR000515:IPR018062; COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; KEGG: dvl:Dvul_0778 binding-protein-dependent transport systems inner membrane component; SPTR: A3I5Y9 Oligopeptide transport system permease protein; PFAM: binding-protein-dependent transport systems inner membrane component.
 
    
 0.887
Your Current Organism:
Desulfonispora thiosulfatigenes
NCBI taxonomy Id: 656914
Other names: D. thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes str. DSM 11270, Desulfonispora thiosulfatigenes strain DSM 11270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.