STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crcBCrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. (125 aa)    
Predicted Functional Partners:
sigI
RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily.
       0.615
SMB90672.1
Anti-sigma factor N-terminus; KEGG: hypothetical protein; SPTR: B0XFQ1 Putative uncharacterized protein.
       0.615
SMB79131.1
H+/Cl-antiporter ClcA; InterPro IPR001807:IPR006037; COGs: COG0038 Chloride channel protein EriC; KEGG: lip:LI0601 voltage-gated chloride channel family protein; SPTR: A5KP61 Putative uncharacterized protein; PFAM: Cl- channel voltage-gated family protein; TrkA-C domain protein.
 
  
 0.571
SMB90651.1
Phage shock protein C (PspC) family protein; InterPro IPR007168; COGs: COG1983 Putative stress-responsive transcriptional regulator protein; KEGG: cbc:CbuK_0644 stress-responsive transcriptional regulator; SPTR: A8TH00 Phage shock protein C, PspC; PFAM: PspC domain protein.
     
 0.512
SMB90765.1
InterPro IPR001268; COGs: COG3261 Ni Fe-hydrogenase III large subunit; KEGG: nam:NAMH_0750 hydrogenase-3, subunit E; SPTR: Q0W2B9 Hydrogenase, large subunit-like protein (HycE-like); PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit.
 
     0.420
Your Current Organism:
Desulfonispora thiosulfatigenes
NCBI taxonomy Id: 656914
Other names: D. thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes str. DSM 11270, Desulfonispora thiosulfatigenes strain DSM 11270
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.