STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB90699.1KEGG: dal:Dalk_1888 ribosomal protein L17. (72 aa)    
Predicted Functional Partners:
SMB90704.1
Hypothetical protein.
       0.559
SMB90688.1
InterPro IPR001789:IPR001867; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; KEGG: gme:Gmet_2693 two component transcriptional regulator; SPTR: P13792 Alkaline phosphatase synthesis transcriptional regulatory protein phoP; SMART: response regulator receiver; PFAM: response regulator receiver; transcriptional regulator domain protein.
       0.498
SMB90693.1
Signal transduction histidine kinase; InterPro IPR004358:IPR003594:IPR003661:IPR003660:IPR005467; COGs: COG0642 Signal transduction histidine kinase; KEGG: gbm:Gbem_2673 heavy metal sensor signal transduction histidine kinase; SPTR: A6UPU7 Sensor protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein.
       0.498
Your Current Organism:
Desulfonispora thiosulfatigenes
NCBI taxonomy Id: 656914
Other names: D. thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes str. DSM 11270, Desulfonispora thiosulfatigenes strain DSM 11270
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.