STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB96446.1Cell division protein FtsL; InterPro IPR007060; KEGG: hypothetical protein; PFAM: Septum formation initiator. (166 aa)    
Predicted Functional Partners:
rsmH
16S rRNA (cytosine1402-N4)-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
  
  
 0.932
SMB96443.1
InterPro IPR001460:IPR005543:IPR005311:IPR011927; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; KEGG: gme:Gmet_0406 penicillin-binding protein, transpeptidase; SPTR: A1HU58 Stage V sporulation protein D; SMART: PASTA domain containing protein; PFAM: penicillin-binding protein transpeptidase; PASTA domain containing protein; Penicillin-binding protein dimerisation domain; PRIAM: Peptidoglycan glycosyltransferase; TIGRFAM: stage V sporulation protein D.
  
 
 0.886
mraZ
MraZ protein; InterPro IPR003444; COGs: COG2001 conserved hypothetical protein; KEGG: sat:SYN_01736 cell division protein; SPTR: Q2RK88 Protein mraZ; PFAM: protein of unknown function UPF0040; TIGRFAM: MraZ protein; Belongs to the MraZ family.
  
    0.795
murE
UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.
       0.544
murF
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
     
 0.537
murD
UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
  
  
 0.528
SMB86405.1
Septum formation initiator; InterPro IPR007060:IPR011922; KEGG: geo:Geob_2927 septum formation initiator; SPTR: A1HRS6 Septum formation initiator; PFAM: Septum formation initiator; TIGRFAM: cell division protein FtsL.
    
 
 0.519
mraY
Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
  
  
 0.494
SMB96417.1
Cell division protein FtsQ; Essential cell division protein.
     
 0.403
Your Current Organism:
Desulfonispora thiosulfatigenes
NCBI taxonomy Id: 656914
Other names: D. thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes str. DSM 11270, Desulfonispora thiosulfatigenes strain DSM 11270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.