STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB96481.1InterPro IPR003813; COGs: COG1908 Coenzyme F420-reducing hydrogenase delta subunit; KEGG: sfu:Sfum_1973 methyl-viologen-reducing hydrogenase, delta subunit; SPTR: Q00405 F420-non-reducing hydrogenase vhc iron-sulfur subunit D; PFAM: methyl-viologen-reducing hydrogenase delta subunit. (145 aa)    
Predicted Functional Partners:
SMB96482.1
Heterodisulfide reductase subunit A; InterPro IPR001327:IPR001450:IPR017900; COGs: COG1148 Heterodisulfide reductase subunit A and related polyferredoxins; KEGG: geo:Geob_3723 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: P96801 CoB--CoM heterodisulfide reductase iron-sulfur subunit A 2; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 0.999
SMB96461.1
Heterodisulfide reductase subunit A; InterPro IPR013027:IPR001327:IPR001450:IPR017900; KEGG: sfu:Sfum_2149 4Fe-4S ferredoxin, iron-sulfur binding domain protein; SPTR: Q2VP82 Heterodisulfide reductase like protein, subunit A; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COGs: COG1148 Heterodisulfide reductase subunit A and related polyferredoxins.
 0.994
SMB96484.1
InterPro IPR004017; COGs: COG2048 Heterodisulfide reductase subunit B; KEGG: geo:Geob_3724 CoB--CoM heterodisulfide reductase; SPTR: Q64AU1 Heterodisulfide reductase subunit B; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; PRIAM: CoB--CoM heterodisulfide reductase.
 
 0.991
SMB96485.1
InterPro IPR017900; COGs: COG1150 Heterodisulfide reductase subunit C; KEGG: dde:Dde_1207 heterodisulfide reductase, C subunit; SPTR: Q64AU0 Heterodisulfide reductase subunit C.
 
 0.987
SMB96479.1
4Fe-4S dicluster domain-containing protein; InterPro IPR001450:IPR017900; KEGG: dal:Dalk_5062 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: Q64DB0 Coenzyme F420-reducing hydrogenase beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein.
  
  0.986
SMB91280.1
NADPH-dependent glutamate synthase beta chain; InterPro IPR000759:IPR013027:IPR000103:IPR001557:IPR001327:IPR0014 50:IPR006655:IPR017900:IPR005829; COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; KEGG: dat:HRM2_22100 HdrL1; SPTR: Q64DA7 Heterodisulfide reductase subunit A and related polyferredoxins; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 0.973
SMB91291.1
4Fe-4S dicluster domain-containing protein; InterPro IPR001450:IPR017900; KEGG: sfu:Sfum_1972 4Fe-4S ferredoxin, iron-sulfur binding domain protein; SPTR: Q64DB0 Coenzyme F420-reducing hydrogenase beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein.
  
  0.938
SMB96473.1
InterPro IPR006137; COGs: COG1941 Coenzyme F420-reducing hydrogenase gamma subunit; KEGG: ade:Adeh_4163 methyl-viologen-reducing hydrogenase, delta subunit; SPTR: B1L5Y5 Coenzyme F420-reducing hydrogenase, gamma subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit.
 0.934
SMB87623.1
Succinate dehydrogenase subunit C; InterPro IPR004017; COGs: COG2048 Heterodisulfide reductase subunit B; KEGG: wsu:WS1922 succinate dehydrogenase subunit C; SPTR: A1HLP7 CoB--CoM heterodisulfide reductase; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; PRIAM: CoB--CoM heterodisulfide reductase.
 
 0.928
SMB89342.1
Iron-sulfur cluster-binding protein; InterPro IPR001450:IPR004017:IPR003741:IPR007087:IPR017900; KEGG: gur:Gura_0152 hypothetical protein; SPTR: A1HPY0 Putative uncharacterized protein; PFAM: protein of unknown function DUF162; protein of unknown function DUF224 cysteine-rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG1139 conserved hypothetical protein containing a ferredoxin-like domain.
  
 0.915
Your Current Organism:
Desulfonispora thiosulfatigenes
NCBI taxonomy Id: 656914
Other names: D. thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes str. DSM 11270, Desulfonispora thiosulfatigenes strain DSM 11270
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