STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB85745.1Amino acid ABC transporter substrate-binding protein, PAAT family; InterPro IPR001638:IPR001320; COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; KEGG: dde:Dde_0168 extracellular solute-binding protein; SPTR: Q8PVM4 Glutamine-binding protein; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; PFAM: extracellular solute-binding protein family 3. (261 aa)    
Predicted Functional Partners:
SMB85742.1
Amino acid ABC transporter membrane protein, PAAT family; InterPro IPR000515:IPR010065; COGs: COG0765 ABC-type amino acid transport system permease component; KEGG: dde:Dde_0167 amino acid ABC transporter permease; SPTR: Q8PVM3 Glutamine transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit.
 0.999
SMB79323.1
Amino acid ABC transporter membrane protein, PAAT family; InterPro IPR000515:IPR010065; COGs: COG0765 ABC-type amino acid transport system permease component; KEGG: dps:DP1983 glutamine ABC-transporter, permease protein (GlnP); SPTR: A3IFN2 Putative uncharacterized protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.
 0.996
SMB86714.1
Amino acid ABC transporter membrane protein, PAAT family; InterPro IPR000515:IPR010065; COGs: COG0765 ABC-type amino acid transport system permease component; KEGG: gbm:Gbem_0984 polar amino acid ABC transporter, inner membrane subunit; SPTR: A1HT15 Polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit.
 0.991
SMB85728.1
Amino acid ABC transporter ATP-binding protein, PAAT family; InterPro IPR003439:IPR003593:IPR017871; COGs: COG1126 ABC-type polar amino acid transport system ATPase component; KEGG: rfr:Rfer_3809 ABC transporter related; SPTR: Q8PVM2 Glutamine transporter, ATP-binding protein; SMART: AAA ATPase; PFAM: ABC transporter related.
 0.979
SMB86710.1
Amino acid ABC transporter ATP-binding protein, PAAT family; InterPro IPR003439:IPR003593:IPR017871; COGs: COG1126 ABC-type polar amino acid transport system ATPase component; KEGG: spe:Spro_0822 ABC transporter-related protein; SPTR: A8TE77 ABC transporter related; SMART: AAA ATPase; PFAM: ABC transporter related.
 0.953
SMB79321.1
Amino acid ABC transporter ATP-binding protein, PAAT family; InterPro IPR003439:IPR003593:IPR017871; COGs: COG1126 ABC-type polar amino acid transport system ATPase component; KEGG: dat:HRM2_23010 GlnQ5; SPTR: A3IFN1 Putative uncharacterized protein; SMART: AAA ATPase; PFAM: ABC transporter related.
 0.915
SMB90585.1
Chorismate mutase; InterPro IPR001086:IPR002912; COGs: COG0077 Prephenate dehydratase; KEGG: sfu:Sfum_3724 phospho-2-dehydro-3-deoxyheptonate aldolase; SPTR: A9A5Y5 Prephenate dehydratase; PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; PRIAM: Chorismate mutase.
    
 0.812
SMB95186.1
Diguanylate cyclase (GGDEF) domain-containing protein; InterPro IPR000160:IPR006674:IPR003660:IPR003607; COGs: COG2206 HD-GYP domain; KEGG: ppr:PBPRA1970 hypothetical protein; SPTR: Q0W2L1 Putative signal transduction protein; SMART: GGDEF domain containing protein; metal-dependent phosphohydrolase HD region; histidine kinase HAMP region domain protein; PFAM: GGDEF domain containing protein; metal-dependent phosphohydrolase HD sub domain; histidine kinase HAMP region domain protein; TIGRFAM: diguanylate cyclase.
    
 0.811
SMB89764.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein; InterPro IPR000160:IPR013656:IPR013767:IPR001610:IPR000014:IPR0007 00; COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; KEGG: bja:bll1362 hypothetical protein; SPTR: A0YMH5 PleD-like protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; TIGRFAM: diguanylate cyclase; PAS sensor protein.
  
 0.730
SMB79879.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein; InterPro IPR013655:IPR000160:IPR006674:IPR013767:IPR001610:IPR0036 07:IPR000014:IPR000700; COGs: COG2206 HD-GYP domain; KEGG: pin:Ping_0273 diguanylate cyclase with PAS/PAC sensor; SPTR: A0YVN1 PleD-like protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein; metal-dependent phosphohydrolase HD region; PAS domain containing protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; metal-dependent phosphohyd [...]
    
 0.726
Your Current Organism:
Desulfonispora thiosulfatigenes
NCBI taxonomy Id: 656914
Other names: D. thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes str. DSM 11270, Desulfonispora thiosulfatigenes strain DSM 11270
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