STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB85817.1InterPro IPR010235; KEGG: mca:MCA0271 hypothetical protein; SPTR: A1HMB0 Nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: Nucleotidyltransferase substrate binding protein HI0074; TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family. (133 aa)    
Predicted Functional Partners:
SMB85837.1
Nucleotidyltransferase domain-containing protein; InterPro IPR002934; KEGG: gbm:Gbem_0754 DNA polymerase beta domain protein region; SPTR: A1HMA9 DNA polymerase, beta domain protein region; PFAM: DNA polymerase beta domain protein region.
 
     0.959
SMB85808.1
Signal transducer regulating beta-lactamase production, contains metallopeptidase domain; InterPro IPR008756; COGs: COG4219 Antirepressor regulating drug resistance predicted signal transduction N-terminal membrane component; KEGG: swd:Swoo_3738 TonB family protein; SPTR: A5KKY2 Putative uncharacterized protein; PFAM: peptidase M56 BlaR1.
       0.495
SMB85814.1
COGs: COG3682 transcriptional regulator protein; KEGG: swp:swp_3949 penicillinase repressor; SPTR: A5KKY1 Putative uncharacterized protein; InterPro IPR005650; PFAM: Penicillinase repressor.
       0.495
SMB82640.1
Conserved hypothetical protein (putative transposase or invertase); KEGG: wol:WD0296 hypothetical protein; SPTR: Q2FP67 Putative uncharacterized protein.
  
     0.405
Your Current Organism:
Desulfonispora thiosulfatigenes
NCBI taxonomy Id: 656914
Other names: D. thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes str. DSM 11270, Desulfonispora thiosulfatigenes strain DSM 11270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.