STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB87403.1Sulfite exporter TauE/SafE; InterPro IPR002781; KEGG: vpa:VP0522 hypothetical protein; SPTR: A3I6N6 Putative uncharacterized protein; PFAM: protein of unknown function DUF81. (253 aa)    
Predicted Functional Partners:
SMB91350.1
Hypothetical protein; KEGG: sat:SYN_00082 permease; SPTR: A1HUD4 Putative uncharacterized protein.
  
     0.541
trpB
Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
       0.441
SMB89145.1
InterPro IPR011138; KEGG: scl:sce8307 succinate dehydrogenase; SPTR: P08064 Succinate dehydrogenase cytochrome b558 subunit; TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family.
  
     0.408
SMB82202.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase; COGs: COG0446 NAD(FAD)-dependent dehydrogenase; KEGG: vfm:VFMJ11_2168 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: A4BEA8 Putative NADH oxidase; InterPro IPR013027:IPR000103:IPR001327:IPR004099:IPR001763; SMART: Rhodanese domain protein; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; Rhodanese domain protein.
  
  
 0.403
SMB96220.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase; InterPro IPR013027:IPR000103:IPR001327:IPR004099:IPR001763; COGs: COG0446 NAD(FAD)-dependent dehydrogenase; KEGG: vpa:VPA0949 putative NADH oxidase; SPTR: A2P2Z9 NADH oxidase, putative; SMART: Rhodanese domain protein; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; Rhodanese domain protein.
  
  
 0.403
Your Current Organism:
Desulfonispora thiosulfatigenes
NCBI taxonomy Id: 656914
Other names: D. thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes str. DSM 11270, Desulfonispora thiosulfatigenes strain DSM 11270
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.