STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB87438.1InterPro IPR006015:IPR006016; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; KEGG: mms:mma_0433 universal stress protein (Usp); SPTR: Q2NEH2 Predicted universal stress protein; PFAM: UspA domain protein. (146 aa)    
Predicted Functional Partners:
SMB82560.1
InterPro IPR006015:IPR006016; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; KEGG: dde:Dde_0589 universal stress protein; SPTR: Q97V57 Putative uncharacterized protein; PFAM: UspA domain protein.
  
     0.766
SMB87416.1
Thymidine phosphorylase; InterPro IPR013102:IPR000312:IPR017459:IPR017872:IPR018090; COGs: COG0213 Thymidine phosphorylase; KEGG: afw:Anae109_0662 pyrimidine-nucleoside phosphorylase; SPTR: P77836 Pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain; Glycosyl transferase, family 3-like; TIGRFAM: pyrimidine-nucleoside phosphorylase.
  
    0.512
SMB87436.1
SPTR: A2U5K2 Membrane protein.
       0.455
SMB87433.1
Hypothetical protein.
       0.439
Your Current Organism:
Desulfonispora thiosulfatigenes
NCBI taxonomy Id: 656914
Other names: D. thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes str. DSM 11270, Desulfonispora thiosulfatigenes strain DSM 11270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.