STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB87680.1Hypothetical protein; InterPro IPR009296; COGs: COG4481 conserved hypothetical protein; SPTR: A1HSK5 Putative uncharacterized protein; PFAM: protein of unknown function DUF951. (61 aa)    
Predicted Functional Partners:
SMB87679.1
PFAM: MscS Mechanosensitive ion channel; InterPro IPR006685; COGs: COG0668 Small-conductance mechanosensitive channel; KEGG: mxa:MXAN_0606 small conductance mechanosensitive ion channel (MscS) family protein; SPTR: A2U525 MscS Mechanosensitive ion channel.
  
    0.844
SMB87676.1
HEAT repeat-containing protein; KEGG: pca:Pcar_0754 hypothetical protein; SPTR: Q46BH5 Putative uncharacterized protein.
       0.787
SMB87671.1
Hypothetical protein; InterPro IPR007197:IPR006638:IPR005911; COGs: COG1242 Fe-S oxidoreductase; KEGG: gme:Gmet_3163 hypothetical protein; SPTR: A1HS41 Conserved hypothetical radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; PFAM: Radical SAM domain protein; TIGRFAM: conserved hypothetical protein.
       0.773
SMB87669.1
Colicin V production protein; InterPro IPR001991.
       0.732
SMB95610.1
Uncharacterized protein, UPF0297 family; InterPro IPR009309; COGs: COG4472 conserved hypothetical protein; SPTR: Q8RAH3 UPF0297 protein TTE1249; PFAM: protein of unknown function DUF965; Belongs to the UPF0297 family.
  
     0.728
SMB94071.1
Hypothetical protein; InterPro IPR007393; COGs: COG2740 nucleic-acid-binding protein implicated in transcription termination; KEGG: gbm:Gbem_1301 protein of unknown function DUF448; SPTR: A1HSB2 Putative uncharacterized protein; PFAM: protein of unknown function DUF448.
  
     0.712
SMB93770.1
Hypothetical protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.
  
     0.645
ychF
Hypothetical protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
  
  
 0.625
SMB89910.1
tRNA (adenine22-N1)-methyltransferase; InterPro IPR006901; COGs: COG2384 SAM-dependent methyltransferase; KEGG: pfs:PFLU4258 hypothetical protein; SPTR: A1HPB2 Putative uncharacterized protein; PFAM: protein of unknown function DUF633.
  
     0.606
SMB94640.1
Stage V sporulation protein B; InterPro IPR004268:IPR002797:IPR002528:IPR014249; COGs: COG0534 Na+-driven multidrug efflux pump; SPTR: A1HRU7 Polysaccharide biosynthesis protein; PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; multi antimicrobial extrusion protein MatE; TIGRFAM: stage V sporulation protein B; KEGG: hypothetical protein.
  
     0.503
Your Current Organism:
Desulfonispora thiosulfatigenes
NCBI taxonomy Id: 656914
Other names: D. thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes str. DSM 11270, Desulfonispora thiosulfatigenes strain DSM 11270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.