STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB87731.1Hypothetical protein; InterPro IPR006076:IPR003953; COGs: COG2509 Uncharacterized FAD-dependent dehydrogenase; KEGG: sat:SYN_02917 FAD-dependent dehydrogenase; SPTR: A1HRK2 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein. (468 aa)    
Predicted Functional Partners:
SMB87718.1
Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
       0.490
SMB87708.1
Uncharacterized conserved protein YybS, DUF2232 family; InterPro IPR018710; COGs: COG4241 membrane protein; KEGG: sat:SYN_00642 hypothetical protein; SPTR: A1HRJ6 Membrane protein-like; PFAM: Protein of unknown function DUF2232, membrane.
 
     0.479
rplI
LSU ribosomal protein L9P; Binds to the 23S rRNA.
       0.452
Your Current Organism:
Desulfonispora thiosulfatigenes
NCBI taxonomy Id: 656914
Other names: D. thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes str. DSM 11270, Desulfonispora thiosulfatigenes strain DSM 11270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.