STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Cooccurrence
Coexpression
Experiments
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[Homology]
Score
SMB88299.1N-acetylmannosaminyltransferase; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid. (253 aa)    
Predicted Functional Partners:
SMB88637.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid); InterPro IPR003362; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; KEGG: ftn:FTN_1429 galactosyl transferase; SPTR: A0XZ34 Putative UDP-galactose phosphate transferase; PFAM: sugar transferase; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase.
   
 0.957
SMB88457.1
Polysaccharide pyruvyl transferase CsaB; COGs: COG2327 conserved hypothetical protein; KEGG: scl:sce2259 hypothetical protein; SPTR: A1HT06 Polysaccharide pyruvyl transferase.
   
 0.879
SMB88486.1
UDP-GlcNAc:undecaprenyl-phosphate GlcNAc-1-phosphate transferase; PFAM: Glycosyl transferase, family 4, conserved region; InterPro IPR018481:IPR018480; COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; KEGG: geo:Geob_2139 phospho-N-acetylmuramoyl-pentapeptide-transferase; SPTR: A2UBL3 Glycosyl transferase, family 4.
 
 
 0.834
SMB88453.1
Polysaccharide pyruvyl transferase; COGs: COG2327 conserved hypothetical protein; KEGG: bur:Bcep18194_A3975 polysaccharide pyruvyl transferase; SPTR: A3IFU1 CsaB protein.
 
   
 0.729
SMB88283.1
Transcriptional attenuator, LytR family; InterPro IPR004474:IPR008265; COGs: COG1316 Transcriptional regulator; KEGG: hypothetical protein; SPTR: A1HSI0 Cell envelope-related transcriptional attenuator; PFAM: cell envelope-related transcriptional attenuator; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family.
 
   
 0.722
SMB92264.1
Tetratricopeptide repeat-containing protein; InterPro IPR001440:IPR013105:IPR019734:IPR013026; COGs: COG3063 Tfp pilus assembly protein PilF; KEGG: TPR Domain containing protein; SPTR: Q24CU0 TPR Domain containing protein; SMART: Tetratricopeptide repeat; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein.
  
 
 0.647
SMB88278.1
TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; InterPro IPR004474:IPR002345; COGs: COG1316 Transcriptional regulator; KEGG: hypothetical protein; SPTR: A1HSI0 Cell envelope-related transcriptional attenuator; PFAM: cell envelope-related transcriptional attenuator.
 
   
 0.630
SMB88673.1
UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase; InterPro IPR000888:IPR013120:IPR001509; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; KEGG: gbm:Gbem_1622 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; SPTR: A3WUD2 Probable NAD dependent epimerase/dehydratase, possibly involved in polysaccharide biosynthesis.
     
 0.587
SMB89122.1
InterPro IPR003331; KEGG: nis:NIS_1259 UDP-N-acetylglucosamine 2-epimerase; SPTR: P39131 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; COGs: COG0381 UDP-N-acetylglucosamine 2-epimerase; PRIAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
  
 0.569
SMB88452.1
Hypothetical protein; SPTR: A1HT07 Putative uncharacterized protein.
 
   
 0.565
Your Current Organism:
Desulfonispora thiosulfatigenes
NCBI taxonomy Id: 656914
Other names: D. thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes str. DSM 11270, Desulfonispora thiosulfatigenes strain DSM 11270
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