STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB81093.1KEGG: dvl:Dvul_1981 hypothetical protein. (262 aa)    
Predicted Functional Partners:
SMB81087.1
Protein of unknown function; KEGG: nmu:Nmul_A1616 hypothetical protein; SPTR: A1HT92 Putative uncharacterized protein.
       0.522
SMB81098.1
Spore germination protein; InterPro IPR018392:IPR001223:IPR002482:IPR011583; COGs: COG3858 glycosyl hydrolase; KEGG: pfl:PFL_1213 glycosy hydrolase family protein; SPTR: A3ICR4 Spore peptidoglycan hydrolase (N-acetylglucosaminidase); SMART: chitinase II; Peptidoglycan-binding LysM; PFAM: glycoside hydrolase family 18; Peptidoglycan-binding lysin domain.
       0.449
Your Current Organism:
Desulfonispora thiosulfatigenes
NCBI taxonomy Id: 656914
Other names: D. thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes str. DSM 11270, Desulfonispora thiosulfatigenes strain DSM 11270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.