STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB81719.1COGs: COG1661 DNA-binding protein with PD1-like DNA-binding motif; SPTR: Q64BG9 Putative uncharacterized protein; KEGG: dol:Dole_1586 hypothetical protein. (147 aa)    
Predicted Functional Partners:
SMB92827.1
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
      
 0.506
SMB81714.1
InterPro IPR003439:IPR003593; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; KEGG: pca:Pcar_2634 ABC-type transport system, ATPase component; SPTR: O31716 Uncharacterized ABC transporter ATP-binding protein ykpA; SMART: AAA ATPase; PFAM: ABC transporter related.
       0.468
SMB81726.1
Aconitase; InterPro IPR001030:IPR000573:IPR018136:IPR006250; COGs: COG1048 Aconitase A; KEGG: afr:AFE_0423 aconitate hydratase; SPTR: A3ERT8 Aconitase A; PFAM: aconitate hydratase domain protein; TIGRFAM: aconitate hydratase.
       0.414
Your Current Organism:
Desulfonispora thiosulfatigenes
NCBI taxonomy Id: 656914
Other names: D. thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes str. DSM 11270, Desulfonispora thiosulfatigenes strain DSM 11270
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