STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB91291.14Fe-4S dicluster domain-containing protein; InterPro IPR001450:IPR017900; KEGG: sfu:Sfum_1972 4Fe-4S ferredoxin, iron-sulfur binding domain protein; SPTR: Q64DB0 Coenzyme F420-reducing hydrogenase beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein. (276 aa)    
Predicted Functional Partners:
SMB91282.1
InterPro IPR003813; COGs: COG1908 Coenzyme F420-reducing hydrogenase delta subunit; KEGG: sfu:Sfum_1973 methyl-viologen-reducing hydrogenase, delta subunit; SPTR: Q64C50 Coenzyme F420-reducing hydrogenase delta subunit; PFAM: methyl-viologen-reducing hydrogenase delta subunit.
  
  0.985
SMB83330.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase; InterPro IPR001450:IPR019752:IPR019456:IPR002880:IPR017900:IPR0118 95; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; KEGG: dvl:Dvul_0348 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; SPTR: A1HPH8 Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; Pyruvate-flavodoxin oxidoreduct [...]
   
 0.970
SMB91280.1
NADPH-dependent glutamate synthase beta chain; InterPro IPR000759:IPR013027:IPR000103:IPR001557:IPR001327:IPR0014 50:IPR006655:IPR017900:IPR005829; COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; KEGG: dat:HRM2_22100 HdrL1; SPTR: Q64DA7 Heterodisulfide reductase subunit A and related polyferredoxins; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
  
 0.957
SMB91295.1
4Fe-4S dicluster domain-containing protein; InterPro IPR017900; KEGG: sfu:Sfum_1971 4Fe-4S ferredoxin, iron-sulfur binding domain protein; SPTR: Q64DB1 Ferredoxin.
 
  
  0.951
SMB91298.1
NAD(P)H-flavin reductase; InterPro IPR001709:IPR001834:IPR001221:IPR008333:IPR001433:IPR0194 80; COGs: COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase; KEGG: sfu:Sfum_1970 oxidoreductase FAD/NAD(P)-binding domain protein; SPTR: Q64DB2 Heterodisulfide reductase cytochrome reductase subunit; PFAM: Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein.
 
     0.942
SMB87924.1
(2Fe-2S) ferredoxin; KEGG: sfu:Sfum_0845 NADH dehydrogenase (quinone); SPTR: B7R2Q5 Respiratory-chain NADH dehydrogenase 51 Kd subunit family.
  
 0.939
SMB96481.1
InterPro IPR003813; COGs: COG1908 Coenzyme F420-reducing hydrogenase delta subunit; KEGG: sfu:Sfum_1973 methyl-viologen-reducing hydrogenase, delta subunit; SPTR: Q00405 F420-non-reducing hydrogenase vhc iron-sulfur subunit D; PFAM: methyl-viologen-reducing hydrogenase delta subunit.
  
  0.938
SMB96485.1
InterPro IPR017900; COGs: COG1150 Heterodisulfide reductase subunit C; KEGG: dde:Dde_1207 heterodisulfide reductase, C subunit; SPTR: Q64AU0 Heterodisulfide reductase subunit C.
 
  
 0.924
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 0.915
SMB96482.1
Heterodisulfide reductase subunit A; InterPro IPR001327:IPR001450:IPR017900; COGs: COG1148 Heterodisulfide reductase subunit A and related polyferredoxins; KEGG: geo:Geob_3723 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: P96801 CoB--CoM heterodisulfide reductase iron-sulfur subunit A 2; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
  
 0.900
Your Current Organism:
Desulfonispora thiosulfatigenes
NCBI taxonomy Id: 656914
Other names: D. thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes str. DSM 11270, Desulfonispora thiosulfatigenes strain DSM 11270
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