STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
comB2-phosphosulfolactate phosphatase; InterPro IPR005238; KEGG: cbs:COXBURSA331_A1552 2-phosphosulfolactate phosphatase; SPTR: Q8R8M3 Probable 2-phosphosulfolactate phosphatase; PFAM: 2-phosphosulfolactate phosphatase; COGs: COG2045 Phosphosulfolactate phosphohydrolase; PRIAM: 2-phosphosulfolactate phosphatase; Belongs to the ComB family. (240 aa)    
Predicted Functional Partners:
SMB96547.1
Phosphosulfolactate synthase; InterPro IPR003830; COGs: COG1809 conserved hypothetical protein; KEGG: xau:Xaut_4872 phosphosulfolactate synthase; SPTR: O27710 Phosphosulfolactate synthase; PFAM: (2R)-phospho-3-sulfolactate synthase ComA; PRIAM: Phosphosulfolactate synthase.
 
 
 0.969
SMB96529.1
UvrD/REP helicase N-terminal domain-containing protein; The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. The AddA nuclease domain is required for chi fragment generation; this subunit has the helicase and 3' -> 5' nuclease activities; Belongs to the helicase family. AddA subfamily.
       0.536
addB
DNA helicase/exodeoxyribonuclease V, subunit B; ATP-dependent DNA helicase; Belongs to the helicase family. AddB/RexB type 1 subfamily.
       0.536
SMB96527.1
Transposase; InterPro IPR002514; KEGG: bcj:BCAS0611 putative transposase; SPTR: A2VUI2 Transposase; PFAM: transposase IS3/IS911 family protein.
       0.467
SMB90819.1
Competence protein ComEC; InterPro IPR001279:IPR004477:IPR004797; COGs: COG2333 hydrolase (metallo-beta-lactamase superfamily); KEGG: dol:Dole_0767 DNA internalization-related competence protein ComEC/Rec2; SPTR: A1HQZ9 DNA internalization-related competence protein ComEC/Rec2; PFAM: ComEC/Rec2-related protein; beta-lactamase domain protein; TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein.
      
 0.402
Your Current Organism:
Desulfonispora thiosulfatigenes
NCBI taxonomy Id: 656914
Other names: D. thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes str. DSM 11270, Desulfonispora thiosulfatigenes strain DSM 11270
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