STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB84675.1InterPro IPR001647; KEGG: mno:Mnod_3413 transcriptional regulator, TetR family; SPTR: A3JU39 Transcriptional regulator, TetR family protein; PFAM: regulatory protein TetR. (201 aa)    
Predicted Functional Partners:
SMB84664.1
ABC-2 type transport system permease protein; InterPro IPR013525:IPR000412; KEGG: pcr:Pcryo_1037 hypothetical protein; SPTR: O29257 ABC transporter, ATP-binding protein, putative; PFAM: ABC-2 type transporter.
 
     0.762
SMB84667.1
InterPro IPR013525:IPR000412; KEGG: rpe:RPE_1668 ABC-2 type transporter; SPTR: A3WX69 Putative ABC transporter, ATP-binding protein; PFAM: ABC-2 type transporter.
 
     0.761
SMB84673.1
HlyD family secretion protein; InterPro IPR006143; COGs: COG1566 Multidrug resistance efflux pump; KEGG: sat:SYN_00240 periplasmic component of efflux system; SPTR: A1HMI0 Secretion protein HlyD family protein; PFAM: secretion protein HlyD family protein.
     
 0.724
SMB87338.1
CoA-substrate-specific enzyme activase, putative; InterPro IPR018709:IPR002731:IPR008275; COGs: COG3581 conserved hypothetical protein; KEGG: ccv:CCV52592_1797 CoA-substrate-specific enzyme activase domain-containing protein; SPTR: A5KKF7 Putative uncharacterized protein; PFAM: Protein of unknown function DUF2229, CoA enzyme activase; ATPase BadF/BadG/BcrA/BcrD type; TIGRFAM: CoA-substrate-specific enzyme activase.
     
 0.522
SMB84690.1
Hypothetical protein.
       0.492
SMB92264.1
Tetratricopeptide repeat-containing protein; InterPro IPR001440:IPR013105:IPR019734:IPR013026; COGs: COG3063 Tfp pilus assembly protein PilF; KEGG: TPR Domain containing protein; SPTR: Q24CU0 TPR Domain containing protein; SMART: Tetratricopeptide repeat; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein.
     
 0.485
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
   
    0.477
SMB80928.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein; InterPro IPR013655:IPR000160:IPR000700:IPR000014; COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; KEGG: pag:PLES_03351 putative sensory box protein; SPTR: A3L087 Putative uncharacterized protein; SMART: GGDEF domain containing protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein.
   
 
 0.428
Your Current Organism:
Desulfonispora thiosulfatigenes
NCBI taxonomy Id: 656914
Other names: D. thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes DSM 11270, Desulfonispora thiosulfatigenes str. DSM 11270, Desulfonispora thiosulfatigenes strain DSM 11270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.