STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARAC_009598RNP domain protein. (366 aa)    
Predicted Functional Partners:
AARAC_002361
Glucose-regulated protein; Belongs to the heat shock protein 70 family.
   
 0.835
AARAC_003319
T-complex protein 1 subunit alpha.
   
  0.828
AARAC_009671
Heterogeneous nuclear ribonucleoprotein HRP1.
  
 
 0.714
AARAC_003214
RNA binding domain protein.
    
 0.714
AARAC_011432
Pre-mRNA splicing factor (Srp1).
    
 0.704
AARAC_009443
Polyadenylate-binding protein 2.
  
 
  0.671
AARAC_001716
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.643
AARAC_009818
Hsp70 chaperone (HscA).
   
  0.641
AARAC_003445
Nuclear cap-binding protein subunit 2.
    
 0.635
AARAC_003422
RNA recognition motif containing protein.
  
 
   0.628
Your Current Organism:
Aspergillus arachidicola
NCBI taxonomy Id: 656916
Other names: A. arachidicola, Aspergillus arachidicola Pildain, Frisvad & Samson, 2008, Aspergillus sp. JV-2007b, CBS 117610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.