STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARAC_007813GBP domain-containing protein. (440 aa)    
Predicted Functional Partners:
AARAC_003578
Reticulon-like protein.
    
 
 0.616
AARAC_010658
NACHT domain-containing protein.
   
 0.613
AARAC_009694
Endosomal sorting complex protein TSG101.
     
 0.546
AARAC_002487
Protein SPG20.
      
 0.524
AARAC_006947
Transmembrane GTPase Fzo1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
  
 0.476
AARAC_003238
Protein YOP1.
    
 
 0.459
AARAC_009790
Uncharacterized protein.
    
 
 0.459
AARAC_008541
AAA domain-containing protein.
   
 
 0.420
AARAC_000654
AAA domain-containing protein.
   
 
 0.420
AARAC_008311
AAA family ATPase.
   
 
 0.420
Your Current Organism:
Aspergillus arachidicola
NCBI taxonomy Id: 656916
Other names: A. arachidicola, Aspergillus arachidicola Pildain, Frisvad & Samson, 2008, Aspergillus sp. JV-2007b, CBS 117610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.