STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARAC_000450UMTA methyltransferase family protein. (315 aa)    
Predicted Functional Partners:
AARAC_006910
C-8 sterol isomerase.
   
 0.548
AARAC_001428
Translation initiation factor EF-2 gamma subunit.
   
 0.541
AARAC_006407
rRNA processing protein Bystin.
   
  0.531
AARAC_009014
Pre-rRNA processing protein Tsr1.
   
  0.530
AARAC_008744
Uncharacterized protein.
    
 0.515
AARAC_011243
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
  0.512
AARAC_009083
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
  0.512
AARAC_004940
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
    
  0.512
AARAC_006272
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.511
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
    
  0.511
Your Current Organism:
Aspergillus arachidicola
NCBI taxonomy Id: 656916
Other names: A. arachidicola, Aspergillus arachidicola Pildain, Frisvad & Samson, 2008, Aspergillus sp. JV-2007b, CBS 117610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.