STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARAC_010845C2HC5 finger protein. (519 aa)    
Predicted Functional Partners:
AARAC_011577
DEAD/DEAH box helicase.
    
 
 0.947
AARAC_009166
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.935
MED17
Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
   0.935
AARAC_000396
Mitochondrial 54S ribosomal protein YmL16; Belongs to the universal ribosomal protein uL6 family.
    
   0.888
AARAC_006024
DEAD/DEAH box DNA helicase (Mer3).
    
 
 0.836
AARAC_010202
AKAP7_NLS domain-containing protein.
    
 
 0.729
AARAC_010569
Pre-mRNA-splicing factor brr2.
    
 
 0.701
AARAC_005790
Proteinase.
    
   0.676
AARAC_010086
Proteinase.
    
   0.676
AARAC_003020
Abhydrolase_4 domain-containing protein.
    
   0.676
Your Current Organism:
Aspergillus arachidicola
NCBI taxonomy Id: 656916
Other names: A. arachidicola, Aspergillus arachidicola Pildain, Frisvad & Samson, 2008, Aspergillus sp. JV-2007b, CBS 117610
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