Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AARAC_000396 | AARAC_003020 | A0A2G7FG01 | A0A2G7FYD1 | Mitochondrial 54S ribosomal protein YmL16; Belongs to the universal ribosomal protein uL6 family. | Abhydrolase_4 domain-containing protein. | 0.884 |
AARAC_000396 | AARAC_005790 | A0A2G7FG01 | A0A2G7FQB7 | Mitochondrial 54S ribosomal protein YmL16; Belongs to the universal ribosomal protein uL6 family. | Proteinase. | 0.884 |
AARAC_000396 | AARAC_010086 | A0A2G7FG01 | A0A2G7FSD2 | Mitochondrial 54S ribosomal protein YmL16; Belongs to the universal ribosomal protein uL6 family. | Proteinase. | 0.884 |
AARAC_000396 | AARAC_010845 | A0A2G7FG01 | A0A2G7FGW1 | Mitochondrial 54S ribosomal protein YmL16; Belongs to the universal ribosomal protein uL6 family. | C2HC5 finger protein. | 0.888 |
AARAC_000396 | MED17 | A0A2G7FG01 | A0A2G7GBJ3 | Mitochondrial 54S ribosomal protein YmL16; Belongs to the universal ribosomal protein uL6 family. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.973 |
AARAC_003020 | AARAC_000396 | A0A2G7FYD1 | A0A2G7FG01 | Abhydrolase_4 domain-containing protein. | Mitochondrial 54S ribosomal protein YmL16; Belongs to the universal ribosomal protein uL6 family. | 0.884 |
AARAC_003020 | AARAC_010845 | A0A2G7FYD1 | A0A2G7FGW1 | Abhydrolase_4 domain-containing protein. | C2HC5 finger protein. | 0.676 |
AARAC_003020 | MED17 | A0A2G7FYD1 | A0A2G7GBJ3 | Abhydrolase_4 domain-containing protein. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.877 |
AARAC_005790 | AARAC_000396 | A0A2G7FQB7 | A0A2G7FG01 | Proteinase. | Mitochondrial 54S ribosomal protein YmL16; Belongs to the universal ribosomal protein uL6 family. | 0.884 |
AARAC_005790 | AARAC_010845 | A0A2G7FQB7 | A0A2G7FGW1 | Proteinase. | C2HC5 finger protein. | 0.676 |
AARAC_005790 | MED17 | A0A2G7FQB7 | A0A2G7GBJ3 | Proteinase. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.877 |
AARAC_006024 | AARAC_010202 | A0A2G7G429 | A0A2G7EM15 | DEAD/DEAH box DNA helicase (Mer3). | AKAP7_NLS domain-containing protein. | 0.797 |
AARAC_006024 | AARAC_010845 | A0A2G7G429 | A0A2G7FGW1 | DEAD/DEAH box DNA helicase (Mer3). | C2HC5 finger protein. | 0.836 |
AARAC_009166 | AARAC_010569 | A0A2G7FHJ8 | A0A2G7FLJ8 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Pre-mRNA-splicing factor brr2. | 0.410 |
AARAC_009166 | AARAC_010845 | A0A2G7FHJ8 | A0A2G7FGW1 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | C2HC5 finger protein. | 0.935 |
AARAC_009166 | MED17 | A0A2G7FHJ8 | A0A2G7GBJ3 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.963 |
AARAC_010086 | AARAC_000396 | A0A2G7FSD2 | A0A2G7FG01 | Proteinase. | Mitochondrial 54S ribosomal protein YmL16; Belongs to the universal ribosomal protein uL6 family. | 0.884 |
AARAC_010086 | AARAC_010845 | A0A2G7FSD2 | A0A2G7FGW1 | Proteinase. | C2HC5 finger protein. | 0.676 |
AARAC_010086 | MED17 | A0A2G7FSD2 | A0A2G7GBJ3 | Proteinase. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.877 |
AARAC_010202 | AARAC_006024 | A0A2G7EM15 | A0A2G7G429 | AKAP7_NLS domain-containing protein. | DEAD/DEAH box DNA helicase (Mer3). | 0.797 |
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