STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARAC_010254Aconitate hydratase. (238 aa)    
Predicted Functional Partners:
AARAC_007852
Fe superoxide dismutase.
   
 
 0.962
AARAC_009201
Mitochondrial 54S ribosomal protein IMG1.
   
 
 0.953
AARAC_007868
Mitochondrial 37S ribosomal protein MRPS8.
   
 
 0.950
AARAC_011474
Mitochondrial 54S ribosomal protein YmL10/YmL18.
   
 
 0.945
AARAC_006646
Uncharacterized protein.
   
   0.944
AARAC_006311
Uncharacterized protein.
   
 
 0.943
AARAC_009638
Mitochondrial 54S ribosomal protein YmL7/YmL5.
   
 
 0.942
AARAC_001431
Uncharacterized protein.
   
 
 0.942
AARAC_009534
Mitochondrial 37S ribosomal protein RSM19; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.941
AARAC_002867
Uncharacterized protein.
  
 
 0.938
Your Current Organism:
Aspergillus arachidicola
NCBI taxonomy Id: 656916
Other names: A. arachidicola, Aspergillus arachidicola Pildain, Frisvad & Samson, 2008, Aspergillus sp. JV-2007b, CBS 117610
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