STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARAC_009320SUMO ligase SizA. (236 aa)    
Predicted Functional Partners:
AARAC_008895
Ubiquitin-like protein SMT3.
    
 0.980
AARAC_001355
SUMO-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.980
AARAC_009457
Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.897
AARAC_003102
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 
 0.851
AARAC_003101
Proliferating cell nuclear antigen.
   
 
 0.851
AARAC_003554
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.
    
 0.841
AARAC_006717
mRNA cap methyltransferase.
    
 
 0.834
AARAC_003969
Postreplication repair E3 ubiquitin-protein ligase rad18.
    
 
 0.792
AARAC_005398
Jumonji family transcription factor.
   
 0.765
AARAC_001362
DNA repair and recombination protein radC.
    
 
 0.761
Your Current Organism:
Aspergillus arachidicola
NCBI taxonomy Id: 656916
Other names: A. arachidicola, Aspergillus arachidicola Pildain, Frisvad & Samson, 2008, Aspergillus sp. JV-2007b, CBS 117610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.