STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARAC_002134Cellobiose dehydrogenase. (386 aa)    
Predicted Functional Partners:
AARAC_005470
Mitochondrial 54S ribosomal protein YmL41.
   
 
 0.776
AARAC_003994
Mitochondrial 54S ribosomal protein YmL17/YmL30.
   
   0.775
AARAC_008380
Mitochondrial 54S ribosomal protein YmL9; Belongs to the universal ribosomal protein uL3 family.
   
   0.760
AARAC_008130
MRP-S28 domain-containing protein.
   
   0.713
AARAC_010335
Ribosomal protein S15.
   
   0.708
AARAC_009201
Mitochondrial 54S ribosomal protein IMG1.
   
 
 0.708
AARAC_009078
Mitochondrial 54S ribosomal protein YmL24/YmL14.
   
 
 0.705
AARAC_007769
Mitochondrial 54S ribosomal protein YmL6.
   
 
 0.692
AARAC_009054
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.691
AARAC_005111
Mitochondrial 54S ribosomal protein YmL4.
   
 
 0.687
Your Current Organism:
Aspergillus arachidicola
NCBI taxonomy Id: 656916
Other names: A. arachidicola, Aspergillus arachidicola Pildain, Frisvad & Samson, 2008, Aspergillus sp. JV-2007b, CBS 117610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.