STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARAC_000220Elongin-C; Belongs to the SKP1 family. (103 aa)    
Predicted Functional Partners:
AARAC_003481
Putative RNA polymerase II transcription factor SIII (Elongin) subunit A.
    
 0.998
AARAC_007037
E3 ubiquitin-protein ligase RBX1.
   
 0.998
AARAC_003482
Ubiquitin-like protein 1.
   
 0.973
AARAC_008457
COP9 signalosome complex subunit 5.
   
 0.967
AARAC_010611
DNA repair protein Rad7.
    
 0.960
AARAC_007266
COP9 signalosome complex subunit 1.
    
  0.954
AARAC_009961
COP9 signalosome complex subunit 6.
   
 0.910
AARAC_011529
Uncharacterized protein.
   
 0.901
AARAC_001284
UBX domain protein (Ubx5).
    
 0.898
AARAC_007178
COP9 signalosome subunit CsnD.
   
  0.881
Your Current Organism:
Aspergillus arachidicola
NCBI taxonomy Id: 656916
Other names: A. arachidicola, Aspergillus arachidicola Pildain, Frisvad & Samson, 2008, Aspergillus sp. JV-2007b, CBS 117610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.