STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARAC_005153Low-temperature viability protein ltv1. (486 aa)    
Predicted Functional Partners:
AARAC_009014
Pre-rRNA processing protein Tsr1.
   
 0.999
AARAC_002865
DNA damage repair protein (Rad9).
   
 0.999
AARAC_008160
Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
    
 0.999
AARAC_005469
Serine/threonine-protein kinase rio2.
   
 0.999
AARAC_006407
rRNA processing protein Bystin.
   
 0.999
AARAC_009083
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
 0.998
AARAC_007567
S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.
   
  0.998
AARAC_004436
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
    
 0.998
AARAC_006272
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.997
AARAC_003222
Pre-rRNA-processing protein pno1.
   
 0.995
Your Current Organism:
Aspergillus arachidicola
NCBI taxonomy Id: 656916
Other names: A. arachidicola, Aspergillus arachidicola Pildain, Frisvad & Samson, 2008, Aspergillus sp. JV-2007b, CBS 117610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.