STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARAC_004009AAA domain-containing protein. (1104 aa)    
Predicted Functional Partners:
AARAC_001279
Putative 3-5 exonuclease.
   
 0.994
AARAC_007581
Replication factor C subunit 5.
   
 0.990
AARAC_005956
Rep_fac_C domain-containing protein.
   
 0.985
AARAC_009620
Replication factor C subunit 3.
   
 0.984
AARAC_010001
Replication factor C subunit 4.
   
 0.982
AARAC_010160
Exonuclease.
   
 0.964
AARAC_003102
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.963
AARAC_003101
Proliferating cell nuclear antigen.
   
 0.963
AARAC_008211
Chromosome segregation protein (SepB).
   
 
 0.951
AARAC_011744
Cell cycle checkpoint protein Rad17.
   
 0.950
Your Current Organism:
Aspergillus arachidicola
NCBI taxonomy Id: 656916
Other names: A. arachidicola, Aspergillus arachidicola Pildain, Frisvad & Samson, 2008, Aspergillus sp. JV-2007b, CBS 117610
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