STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARAC_009141Arylsulfatase; Belongs to the sulfatase family. (585 aa)    
Predicted Functional Partners:
AARAC_006421
Beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
  
 0.924
AARAC_011152
Beta-hexosaminidase.
    
 0.899
AARAC_007484
Beta-N-hexosaminidase.
    
 0.896
AARAC_005387
Arylsulfatase.
  
 
 
0.722
AARAC_010138
Glycoside hydrolase family 2 protein.
  
 0.678
AARAC_000076
Hydrolase.
  
 0.678
MED18
Mediator of RNA polymerase II transcription subunit 18; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
 
 0.633
AARAC_001390
Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
   
    0.624
AARAC_010950
AP-1 complex subunit gamma.
     
 0.609
AARAC_004216
Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery.
    
 
 0.607
Your Current Organism:
Aspergillus arachidicola
NCBI taxonomy Id: 656916
Other names: A. arachidicola, Aspergillus arachidicola Pildain, Frisvad & Samson, 2008, Aspergillus sp. JV-2007b, CBS 117610
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.