STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARAC_009151Histone H2A; Belongs to the histone H2A family. (133 aa)    
Predicted Functional Partners:
AARAC_009149
Histone H2B; Belongs to the histone H2B family.
 
 0.999
AARAC_011275
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
 
 0.994
AARAC_006696
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
 
 0.994
AARAC_011276
Histone H3; Belongs to the histone H3 family.
 
 0.987
AARAC_006969
RNA polymerase I specific transcription initiation factor Rrn7.
    
 0.986
AARAC_004203
Histone H3-like centromeric protein cse-4.
 
 
 0.984
AARAC_009631
Histone H2A; Belongs to the histone H2A family.
  
0.982
AARAC_011772
Transcription elongation complex subunit (Cdc68).
   
 
 0.979
AARAC_005665
DNA-directed RNA polymerase II subunit RPB3.
    
 0.968
AARAC_008126
ISWI chromatin-remodeling complex ATPase ISW2.
   
 0.965
Your Current Organism:
Aspergillus arachidicola
NCBI taxonomy Id: 656916
Other names: A. arachidicola, Aspergillus arachidicola Pildain, Frisvad & Samson, 2008, Aspergillus sp. JV-2007b, CBS 117610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.