STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARAC_006295Translation machinery-associated protein 7. (68 aa)    
Predicted Functional Partners:
AARAC_003482
Ubiquitin-like protein 1.
   
    0.845
AARAC_009258
PX domain protein.
   
    0.789
AARAC_007273
Small nuclear ribonucleoprotein G.
   
    0.783
AARAC_011326
Proteasome maturation factor Ump1.
   
    0.782
AARAC_010330
Ubiquitin-like protein (HubA).
   
    0.780
AARAC_007472
Ubiquitin-like domain-containing protein.
   
    0.780
AARAC_001386
Cytochrome c subunit.
   
    0.719
AARAC_005741
DsDNA-binding protein PDCD5.
   
  
 0.645
AARAC_002866
Putative ribosome biogenesis protein nop10.
   
    0.626
AARAC_008830
4F5 domain-containing protein.
   
    0.618
Your Current Organism:
Aspergillus arachidicola
NCBI taxonomy Id: 656916
Other names: A. arachidicola, Aspergillus arachidicola Pildain, Frisvad & Samson, 2008, Aspergillus sp. JV-2007b, CBS 117610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.