STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARAC_006306Transcription factor TFIIIC complex subunit Tfc6. (736 aa)    
Predicted Functional Partners:
AARAC_008228
RNA polymerase III transcription factor subunit.
    
 0.981
AARAC_003092
RNA polymerase III transcription factor TFIIIC subunit (Tfc4).
  
 
 0.969
AARAC_008475
TFIIIC transcription initiation factor complex subunits Tfc3.
  
 
 0.966
AARAC_010187
Uncharacterized protein.
    
 0.954
AARAC_008600
Phosphoglycerate mutase family protein.
    
 
 0.743
AARAC_001109
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.742
AARAC_009735
Transcription factor TFIIIB complex subunit Brf1.
   
 0.719
AARAC_010975
TATA-box-binding protein.
    
 0.713
AARAC_000621
Cytochrome B5 mitochondrial; Belongs to the cytochrome b5 family.
    
  0.652
AARAC_006831
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.652
Your Current Organism:
Aspergillus arachidicola
NCBI taxonomy Id: 656916
Other names: A. arachidicola, Aspergillus arachidicola Pildain, Frisvad & Samson, 2008, Aspergillus sp. JV-2007b, CBS 117610
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