STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARAC_005750Uncharacterized protein. (267 aa)    
Predicted Functional Partners:
AARAC_005153
Low-temperature viability protein ltv1.
   
    0.837
AARAC_006407
rRNA processing protein Bystin.
   
  
 0.829
AARAC_000322
Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.
   
    0.788
AARAC_010281
Uncharacterized protein.
   
    0.788
AARAC_008833
rRNA processing protein gar2.
   
    0.782
AARAC_001123
rRNA processing protein.
   
    0.782
AARAC_002541
Ribosomal RNA processing protein.
   
    0.782
AARAC_000333
Pre-rRNA processing protein Esf1.
   
    0.779
AARAC_007258
Ribosome biogenesis protein.
   
   0.765
AARAC_011304
SnoRNA binding protein.
   
   0.758
Your Current Organism:
Aspergillus arachidicola
NCBI taxonomy Id: 656916
Other names: A. arachidicola, Aspergillus arachidicola Pildain, Frisvad & Samson, 2008, Aspergillus sp. JV-2007b, CBS 117610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.