STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARAC_007685Nbl1_Borealin_N domain-containing protein. (388 aa)    
Predicted Functional Partners:
AARAC_004880
Ankyrin repeat-containing protein.
   
  0.540
AARAC_003090
Ankyrin 2.
   
  0.540
AARAC_002422
Urea carboxylase.
    
  0.504
AARAC_001038
Uncharacterized protein.
    
  0.504
AARAC_006303
Uncharacterized protein.
  
 
  0.444
AARAC_009071
Histone acetylase complex subunit MRG15-2.
    
  0.436
AARAC_007917
RanBP1 domain protein.
    
  0.435
AARAC_003092
RNA polymerase III transcription factor TFIIIC subunit (Tfc4).
    
  0.429
AARAC_008895
Ubiquitin-like protein SMT3.
    
  0.429
AARAC_004662
C6 transcription factor.
    
  0.428
Your Current Organism:
Aspergillus arachidicola
NCBI taxonomy Id: 656916
Other names: A. arachidicola, Aspergillus arachidicola Pildain, Frisvad & Samson, 2008, Aspergillus sp. JV-2007b, CBS 117610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.