STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARAC_001817Integral membrane protein. (362 aa)    
Predicted Functional Partners:
AARAC_007917
RanBP1 domain protein.
    
  0.724
AARAC_009441
Aminotransferase.
   
 
  0.527
AARAC_008363
Uncharacterized protein.
   
 0.468
AARAC_008390
Protein transport protein SEC13; Belongs to the WD repeat SEC13 family.
    
 0.468
AARAC_004503
Nuclear pore protein (SEH1); Belongs to the WD repeat SEC13 family.
    
 0.465
AARAC_002557
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.462
AARAC_004959
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.461
AARAC_007566
Uncharacterized protein.
    
  0.458
AARAC_007565
Uncharacterized protein.
    
  0.458
AARAC_003499
Uncharacterized protein.
    
  0.458
Your Current Organism:
Aspergillus arachidicola
NCBI taxonomy Id: 656916
Other names: A. arachidicola, Aspergillus arachidicola Pildain, Frisvad & Samson, 2008, Aspergillus sp. JV-2007b, CBS 117610
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