AARAC_002282 protein (Aspergillus arachidicola)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AARAC_002282

Short-chain dehydrogenase/reductase. (288 aa)

Predicted Functional Partners:

AARAC_006095

0.583

AARAC_006452

0.583

AARAC_001720

0.583

AARAC_011417

0.583

AARAC_006576

0.583

AARAC_002859

0.574

AARAC_010190

0.574

AARAC_007364

0.574

AARAC_004052

0.565

AARAC_003513

0.565

Your Current Organism:

Aspergillus arachidicola

NCBI taxonomy Id: 656916
Other names: A. arachidicola, Aspergillus arachidicola Pildain, Frisvad & Samson, 2008, Aspergillus sp. JV-2007b, CBS 117610

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AARAC_001720	AARAC_002282	A0A2G7FZ11	A0A2G7FUY7	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	Short-chain dehydrogenase/reductase.	0.583
AARAC_001720	AARAC_002859	A0A2G7FZ11	A0A2G7FKX3	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	2Fe-2S ferredoxin-type domain-containing protein.	0.660
AARAC_001720	AARAC_006095	A0A2G7FZ11	A0A2G7FKC5	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	Nonribosomal peptide synthase.	0.751
AARAC_001720	AARAC_006452	A0A2G7FZ11	A0A2G7FPU9	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	Choline dehydrogenase.	0.751
AARAC_001720	AARAC_006576	A0A2G7FZ11	A0A2G7G936	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	Cytochrome b5 heme-binding domain-containing protein.	0.768
AARAC_001720	AARAC_010190	A0A2G7FZ11	A0A2G7FRK7	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	Metallo-beta-lactamase family protein.	0.660
AARAC_001720	AARAC_011417	A0A2G7FZ11	A0A2G7G252	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.757
AARAC_002282	AARAC_001720	A0A2G7FUY7	A0A2G7FZ11	Short-chain dehydrogenase/reductase.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.583
AARAC_002282	AARAC_002859	A0A2G7FUY7	A0A2G7FKX3	Short-chain dehydrogenase/reductase.	2Fe-2S ferredoxin-type domain-containing protein.	0.574
AARAC_002282	AARAC_003513	A0A2G7FUY7	A0A2G7GAN4	Short-chain dehydrogenase/reductase.	Dihydrofolate reductase.	0.565
AARAC_002282	AARAC_004052	A0A2G7FUY7	A0A2G7G8A3	Short-chain dehydrogenase/reductase.	Dihydrofolate reductase; Belongs to the dihydrofolate reductase family.	0.565
AARAC_002282	AARAC_006095	A0A2G7FUY7	A0A2G7FKC5	Short-chain dehydrogenase/reductase.	Nonribosomal peptide synthase.	0.583
AARAC_002282	AARAC_006452	A0A2G7FUY7	A0A2G7FPU9	Short-chain dehydrogenase/reductase.	Choline dehydrogenase.	0.583
AARAC_002282	AARAC_006576	A0A2G7FUY7	A0A2G7G936	Short-chain dehydrogenase/reductase.	Cytochrome b5 heme-binding domain-containing protein.	0.583
AARAC_002282	AARAC_007364	A0A2G7FUY7	A0A2G7FX98	Short-chain dehydrogenase/reductase.	SCA7 domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.574
AARAC_002282	AARAC_010190	A0A2G7FUY7	A0A2G7FRK7	Short-chain dehydrogenase/reductase.	Metallo-beta-lactamase family protein.	0.574
AARAC_002282	AARAC_011417	A0A2G7FUY7	A0A2G7G252	Short-chain dehydrogenase/reductase.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.583
AARAC_002859	AARAC_001720	A0A2G7FKX3	A0A2G7FZ11	2Fe-2S ferredoxin-type domain-containing protein.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.660
AARAC_002859	AARAC_002282	A0A2G7FKX3	A0A2G7FUY7	2Fe-2S ferredoxin-type domain-containing protein.	Short-chain dehydrogenase/reductase.	0.574
AARAC_002859	AARAC_006095	A0A2G7FKX3	A0A2G7FKC5	2Fe-2S ferredoxin-type domain-containing protein.	Nonribosomal peptide synthase.	0.660