Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AARAC_001681 | AARAC_005367 | A0A2G7FIL9 | A0A2G7G1H0 | Amino acid transporter. | Translation initiation factor eIF4E; Belongs to the eukaryotic initiation factor 4E family. | 0.873 |
AARAC_001681 | AARAC_007158 | A0A2G7FIL9 | A0A2G7GBD8 | Amino acid transporter. | Uncharacterized protein. | 0.873 |
AARAC_001681 | AARAC_008162 | A0A2G7FIL9 | A0A2G7FQW7 | Amino acid transporter. | Eukaryotic translation initiation factor 4E-1; Belongs to the eukaryotic initiation factor 4E family. | 0.873 |
AARAC_001681 | AARAC_008260 | A0A2G7FIL9 | A0A2G7G6N2 | Amino acid transporter. | PAB1 binding protein (Pbp1). | 0.442 |
AARAC_001681 | AARAC_009704 | A0A2G7FIL9 | A0A2G7G2N7 | Amino acid transporter. | RNA binding protein. | 0.923 |
AARAC_001681 | AARAC_011596 | A0A2G7FIL9 | A0A2G7G443 | Amino acid transporter. | snRNA cap binding complex subunit (Gcr3). | 0.750 |
AARAC_001681 | PAN2 | A0A2G7FIL9 | A0A2G7GAW3 | Amino acid transporter. | PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] | 0.725 |
AARAC_001681 | PAN3 | A0A2G7FIL9 | A0A2G7FHP4 | Amino acid transporter. | PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent 5'-3' exo [...] | 0.655 |
AARAC_002384 | AARAC_008162 | A0A2G7GAU3 | A0A2G7FQW7 | Translation release factor eRF3. | Eukaryotic translation initiation factor 4E-1; Belongs to the eukaryotic initiation factor 4E family. | 0.496 |
AARAC_002384 | AARAC_009704 | A0A2G7GAU3 | A0A2G7G2N7 | Translation release factor eRF3. | RNA binding protein. | 0.888 |
AARAC_002384 | AARAC_011248 | A0A2G7GAU3 | A0A2G7FLY6 | Translation release factor eRF3. | Uncharacterized protein; Belongs to the DEAD box helicase family. | 0.461 |
AARAC_002384 | AARAC_011596 | A0A2G7GAU3 | A0A2G7G443 | Translation release factor eRF3. | snRNA cap binding complex subunit (Gcr3). | 0.479 |
AARAC_005367 | AARAC_001681 | A0A2G7G1H0 | A0A2G7FIL9 | Translation initiation factor eIF4E; Belongs to the eukaryotic initiation factor 4E family. | Amino acid transporter. | 0.873 |
AARAC_005367 | AARAC_008162 | A0A2G7G1H0 | A0A2G7FQW7 | Translation initiation factor eIF4E; Belongs to the eukaryotic initiation factor 4E family. | Eukaryotic translation initiation factor 4E-1; Belongs to the eukaryotic initiation factor 4E family. | 0.642 |
AARAC_005367 | AARAC_009704 | A0A2G7G1H0 | A0A2G7G2N7 | Translation initiation factor eIF4E; Belongs to the eukaryotic initiation factor 4E family. | RNA binding protein. | 0.894 |
AARAC_005367 | AARAC_011248 | A0A2G7G1H0 | A0A2G7FLY6 | Translation initiation factor eIF4E; Belongs to the eukaryotic initiation factor 4E family. | Uncharacterized protein; Belongs to the DEAD box helicase family. | 0.894 |
AARAC_005367 | AARAC_011596 | A0A2G7G1H0 | A0A2G7G443 | Translation initiation factor eIF4E; Belongs to the eukaryotic initiation factor 4E family. | snRNA cap binding complex subunit (Gcr3). | 0.702 |
AARAC_005367 | PAN2 | A0A2G7G1H0 | A0A2G7GAW3 | Translation initiation factor eIF4E; Belongs to the eukaryotic initiation factor 4E family. | PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] | 0.587 |
AARAC_005367 | PAN3 | A0A2G7G1H0 | A0A2G7FHP4 | Translation initiation factor eIF4E; Belongs to the eukaryotic initiation factor 4E family. | PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent 5'-3' exo [...] | 0.641 |
AARAC_007158 | AARAC_001681 | A0A2G7GBD8 | A0A2G7FIL9 | Uncharacterized protein. | Amino acid transporter. | 0.873 |
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